Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC092989.1-201ENST00000481235 277 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC079395.1-201ENST00000510981 262 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR3912-201ENST00000577566 105 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AC099785.1-201ENST00000605697 437 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR98-201ENST00000606724 119 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR6715A-201ENST00000615929 79 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 AL136221.1-201ENST00000621449 509 ntBASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR454-201ENST00000390180 115 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 AC090960.1-201ENST00000421072 306 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-165P-201ENST00000458864 60 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 AC107401.1-201ENST00000503426 685 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 AC010486.2-201ENST00000505572 483 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-41P-201ENST00000515917 61 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 RNU7-99P-201ENST00000516271 62 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 AC025647.1-201ENST00000517879 253 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 MIR8087-201ENST00000612745 78 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 AP002782.1-201ENST00000623107 614 ntBASIC-0.65□□□□□ -2.51
CHKB-CPT1BH3BT56 RNA5SP48-201ENST00000363969 126 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-883P-201ENST00000384597 107 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU2-3P-201ENST00000410144 191 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC008134.1-201ENST00000420943 193 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC005042.3-201ENST00000453230 174 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AL158211.1-201ENST00000566763 763 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC104984.5-201ENST00000586878 94 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC068790.2-201ENST00000602601 557 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 AC093875.1-201ENST00000623688 504 ntBASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.66□□□□□ -2.52
CHKB-CPT1BH3BT56 MTND4P4-201ENST00000439033 1366 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 MIRLET7C-201ENST00000362160 84 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNY3P13-201ENST00000365542 102 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-716P-201ENST00000365621 103 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORA2A-201ENST00000383885 135 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR320C1-201ENST00000408566 88 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORD100-201ENST00000408573 76 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-613P-201ENST00000410412 108 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU4-46P-201ENST00000410818 138 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 AL358176.2-201ENST00000425769 204 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 AC074290.1-201ENST00000448883 135 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORD126-201ENST00000459475 77 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-977P-201ENST00000516411 103 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 VN1R87P-201ENST00000596706 487 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR8064-201ENST00000612863 90 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR6515-201ENST00000619843 57 ntBASIC-0.67□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-371P-201ENST00000364283 108 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORD114-12-201ENST00000365400 75 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORA32.3-201ENST00000384772 121 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR598-201ENST00000384868 97 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR1197-201ENST00000408818 88 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR1302-7-201ENST00000408841 72 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU2-62P-201ENST00000410868 191 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 AL158053.1-201ENST00000441503 453 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 AP001372.4-201ENST00000524889 472 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 MRPS36P4-201ENST00000534436 298 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 AC005562.2-201ENST00000618264 111 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 U6.73-201ENST00000619194 103 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 AC098679.4-201ENST00000624241 654 ntBASIC-0.68□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORD114-31-201ENST00000363219 75 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORD114-28-201ENST00000363610 72 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-336P-201ENST00000364891 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNY1P4-201ENST00000384595 115 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR586-201ENST00000385035 97 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNA5SP95-201ENST00000410319 137 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 MTND1P32-201ENST00000433043 938 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU7-57P-201ENST00000459540 60 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-848P-201ENST00000515948 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-377P-201ENST00000515965 102 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-617P-201ENST00000516147 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-473P-201ENST00000516164 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU7-28P-201ENST00000516759 62 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-782P-201ENST00000516852 104 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AC013828.2-201ENST00000532487 235 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AC027288.2-201ENST00000553028 243 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 RN7SL793P-201ENST00000583259 296 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms