Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-174P-201ENST00000410406 106 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AC079354.2-201ENST00000453523 154 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 RNU7-187P-201ENST00000458985 68 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 RPL39P38-201ENST00000467018 153 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 RNU7-40P-201ENST00000516397 64 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 MIR4255-201ENST00000579351 72 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 MIR3611-201ENST00000584484 83 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AC022217.4-201ENST00000604389 163 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 AL645939.4-201ENST00000604495 135 ntBASIC0.94□□□□□ -2.26
SMKR1H3BMG3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SMKR1H3BMG3 SNORD114-1-201ENST00000362705 72 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 SNORD115-32-201ENST00000364079 82 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.93□□□□□ -2.26
SMKR1H3BMG3 RNU6-790P-201ENST00000384479 105 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 MIR32-201ENST00000384965 70 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 MTCO3P40-201ENST00000392516 676 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.93□□□□□ -2.26
SMKR1H3BMG3 NDUFA5P4-201ENST00000436704 385 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 RPS29P29-201ENST00000456396 171 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 UBL5P3-201ENST00000475112 231 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 MTCYBP18-201ENST00000501056 747 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 Y_RNA.693-201ENST00000516641 110 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 RNU6-58P-201ENST00000517143 103 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.93□□□□□ -2.26
SMKR1H3BMG3 MTND1P15-201ENST00000579262 949 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AC011494.1-201ENST00000596454 237 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 MIR8054-201ENST00000620877 86 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AC006504.8-201ENST00000621046 635 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AC124864.2-201ENST00000624736 186 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 AC068137.3-201ENST00000639191 341 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 OR4G1P-203ENST00000641984 1631 ntBASIC0.93□□□□□ -2.26
SMKR1H3BMG3 RNU6-259P-201ENST00000383999 107 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 MIR1285-1-201ENST00000408593 84 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 MIR1185-2-201ENST00000408687 86 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 SNORA11-201ENST00000408789 128 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 RNU6-1068P-201ENST00000410958 103 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 PCMTD1P1-201ENST00000455560 355 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 RNU1-123P-201ENST00000458950 160 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 MTCO2P30-201ENST00000503662 364 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 RN7SKP179-201ENST00000516126 217 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 SNORA25.14-201ENST00000516481 132 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 RNU6-405P-201ENST00000516637 110 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AL137100.2-201ENST00000555786 315 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AL390123.1-201ENST00000603216 237 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 MIR6798-201ENST00000612887 67 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AL359880.1-201ENST00000621879 266 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.92□□□□□ -2.26
SMKR1H3BMG3 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
SMKR1H3BMG3 RNU1-22P-201ENST00000363334 158 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 Y_RNA.151-201ENST00000363566 112 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 U3.8-201ENST00000363675 217 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 RNU6-137P-201ENST00000363680 108 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORD116-9-201ENST00000384000 95 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORD116-3-201ENST00000384287 95 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORA25-201ENST00000384384 134 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORD116-7-201ENST00000384404 95 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORD116-5-201ENST00000384462 95 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 RNU6-440P-201ENST00000390882 105 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 MRPL42P3-201ENST00000401492 326 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC245047.3-201ENST00000429428 127 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 Z82188.1-201ENST00000436709 154 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC005002.2-201ENST00000438228 269 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.91□□□□□ -2.26
SMKR1H3BMG3 SNORD116-28-201ENST00000516123 91 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 Y_RNA.688-201ENST00000516565 95 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 RNA5SP454-201ENST00000517231 127 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AL512360.1-201ENST00000555346 234 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC004584.2-201ENST00000570407 410 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC022432.1-201ENST00000595739 310 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 BX284668.6-201ENST00000606899 438 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 U6.73-201ENST00000619194 103 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 AC027335.2-201ENST00000624030 375 ntBASIC0.91□□□□□ -2.26
SMKR1H3BMG3 RNU1-124P-201ENST00000363861 145 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 SNORD87-201ENST00000364849 89 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 MIR153-2-201ENST00000385225 87 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms