Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 MTND4P17-201ENST00000470444 350 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 RPL7P42-201ENST00000481005 679 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 SNORA25.14-201ENST00000516481 132 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 Y_RNA.708-201ENST00000516950 96 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 RNU1-117P-201ENST00000517041 158 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 AC027288.2-201ENST00000553028 243 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 UBL5P4-201ENST00000562584 236 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 AC022306.2-201ENST00000617563 647 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 DUXAP9-208ENST00000622815 614 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 AC091932.3-201ENST00000624223 323 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 AC099654.14-201ENST00000638599 341 ntBASIC1.78□□□□□ -2.12
NPIPA3F8WFD2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 SNORD115-8-201ENST00000363856 82 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 SNORD115-38-201ENST00000365037 82 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 SNORD81.2-201ENST00000365153 76 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AC138393.2-201ENST00000414742 246 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AC097473.1-201ENST00000508142 408 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AL355802.3-201ENST00000607571 545 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 PISRT1.1-201ENST00000616930 107 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 AL359697.1-201ENST00000624879 587 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 TPTEP1-208ENST00000636884 213 ntBASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPIPA3F8WFD2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.166-201ENST00000363730 102 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 RNU6-873P-201ENST00000363833 107 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 RNU6-1283P-201ENST00000365314 105 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 SNORA8-201ENST00000384574 139 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 RNU6-331P-201ENST00000384724 107 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AL033519.2-201ENST00000403958 392 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 USMG5P1-201ENST00000425964 177 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AL353997.1-201ENST00000432936 108 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AC098614.3-201ENST00000438957 440 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AC007677.1-201ENST00000445757 515 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 HMGN1P12-201ENST00000499125 195 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 RNA5SP384-201ENST00000516615 116 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 SUMO2P18-201ENST00000518873 252 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AC134698.4-201ENST00000523451 826 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 MIR4448-201ENST00000584360 86 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AC005786.1-201ENST00000588553 154 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 AC022513.1-201ENST00000624512 117 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
NPIPA3F8WFD2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNU6-727P-201ENST00000363592 107 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.404-201ENST00000383978 102 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNU6-245P-201ENST00000384020 107 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 SNORA48.1-201ENST00000390879 135 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNU4-14P-201ENST00000410858 122 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC244636.1-201ENST00000421152 228 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AL357134.1-201ENST00000445848 426 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC114982.1-201ENST00000469402 321 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AP000870.1-201ENST00000472927 406 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 HMGN2P9-201ENST00000476875 229 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 MRPS17P9-201ENST00000511924 393 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC067942.3-201ENST00000512025 362 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 RNU6-948P-201ENST00000516374 107 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 SNORA20.3-201ENST00000516880 132 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.706-201ENST00000516933 99 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC104581.2-201ENST00000572227 430 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC005014.2-201ENST00000607795 599 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 AC099654.5-201ENST00000636479 350 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 ZNF72P-201ENST00000425869 1908 ntBASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.75□□□□□ -2.13
NPIPA3F8WFD2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RNU6-975P-201ENST00000384296 105 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms