Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR6779-201ENST00000617283 64 ntBASIC-1.5□□□□□ -2.65
LINC01549A6NIU2 RNU1-76P-201ENST00000362903 159 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 RNA5SP48-201ENST00000363969 126 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 SNORD95.1-201ENST00000364099 68 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 RNU6-142P-201ENST00000384019 107 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 SNORD83B-201ENST00000386745 93 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 MIR873-201ENST00000401120 77 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 RNA5SP95-201ENST00000410319 137 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 AC106883.1-201ENST00000418805 562 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 BX119904.4-201ENST00000424402 301 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 CALM2P4-201ENST00000430810 426 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 MTCYBP39-201ENST00000437562 491 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 SNORA14.1-201ENST00000516113 141 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 SNORA27.4-201ENST00000516650 95 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 AC110760.3-201ENST00000598794 467 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 AC012507.3-201ENST00000603556 477 ntBASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.51□□□□□ -2.65
LINC01549A6NIU2 MIR655-201ENST00000362159 97 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 SNORD56.1-201ENST00000362913 68 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 U8.16-201ENST00000391279 133 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 RNU6-138P-201ENST00000515952 107 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 MTCO3P15-201ENST00000526563 574 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 RPL17P51-201ENST00000605218 238 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 AC008250.2-201ENST00000615261 205 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 FRG1KP-201ENST00000623592 341 ntBASIC-1.52□□□□□ -2.65
LINC01549A6NIU2 RNU6-114P-201ENST00000384704 105 ntBASIC-1.53□□□□□ -2.65
LINC01549A6NIU2 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.53□□□□□ -2.65
LINC01549A6NIU2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
LINC01549A6NIU2 RNU7-41P-201ENST00000515917 61 ntBASIC-1.53□□□□□ -2.65
LINC01549A6NIU2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-1.53□□□□□ -2.65
LINC01549A6NIU2 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 RNA5SP117-201ENST00000365294 118 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 MIR526A1-201ENST00000384897 85 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 RPL21P38-201ENST00000418090 167 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 AC006026.2-201ENST00000457376 180 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 AL357080.1-201ENST00000617394 239 ntBASIC-1.54□□□□□ -2.66
LINC01549A6NIU2 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 RNU6-934P-201ENST00000365154 107 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 MIR501-201ENST00000390204 84 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AL359634.1-202ENST00000404721 284 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 SCARNA18-201ENST00000459004 134 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AC079382.1-201ENST00000493346 557 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AC091885.1-201ENST00000506658 268 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 RNU7-12P-201ENST00000516030 62 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 IGKV1-22-201ENST00000524313 326 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 DEFB130C-202ENST00000530001 230 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 MIR4676-201ENST00000583078 72 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AL117336.2-201ENST00000602435 335 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AL139286.2-201ENST00000606838 396 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 AC091304.9-201ENST00000612091 226 ntBASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.55□□□□□ -2.66
LINC01549A6NIU2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 RNA5SP368-201ENST00000364298 116 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 AC244250.2-201ENST00000418731 148 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 MTCO2P23-201ENST00000425216 680 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 snoU109.2-201ENST00000459316 135 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 AC010424.1-201ENST00000506336 297 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 MIR548AD-201ENST00000584780 82 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 AC245008.1-201ENST00000608123 476 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 MIR6828-201ENST00000636181 60 ntBASIC-1.56□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 MIR1302-7-201ENST00000408841 72 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 RNA5SP201-201ENST00000410316 124 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 RPS3AP3-201ENST00000411933 242 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 AC007969.2-201ENST00000441891 191 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 SUMO1P2-201ENST00000452524 304 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 AC006380.1-201ENST00000603598 186 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 AP002802.2-201ENST00000605877 235 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 SNORD98-201ENST00000636377 67 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 MTND5P33-201ENST00000571250 1450 ntBASIC-1.57□□□□□ -2.66
LINC01549A6NIU2 RNU6-97P-201ENST00000363387 104 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 SNORA75.1-201ENST00000391130 148 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 MTCO2P8-201ENST00000412213 658 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 FCF1P9-201ENST00000412546 282 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 AL591704.1-201ENST00000432574 275 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms