Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 MIR6504-201ENST00000613520 61 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC040896.1-201ENST00000613819 479 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 RNY3P9-201ENST00000384727 106 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 MIR549A-201ENST00000385268 96 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AL356776.1-201ENST00000406574 447 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AL663109.1-201ENST00000411498 844 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 RNU7-34P-201ENST00000459394 64 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AL163195.1-201ENST00000496941 348 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC091885.1-201ENST00000506658 268 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC092436.3-201ENST00000511788 257 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.695-201ENST00000516715 107 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC121247.2-201ENST00000604776 136 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 MIR8076-201ENST00000611401 83 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 RMST_3.1-201ENST00000611651 109 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 FER-210ENST00000628534 558 ntTSL 5 BASIC1.05□□□□□ -2.24
SMCO2A6NFE2 OR5AK4P-201ENST00000635912 903 ntBASIC1.05□□□□□ -2.24
SMCO2A6NFE2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SMCO2A6NFE2 OR4G1P-203ENST00000641984 1631 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.1-201ENST00000352915 104 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.123-201ENST00000363338 102 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RNA5SP259-201ENST00000365541 109 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RNU4-20P-201ENST00000365601 151 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.378-201ENST00000365652 113 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RNU6-968P-201ENST00000384076 107 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RPL21P1-201ENST00000399532 476 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC083798.1-201ENST00000472671 131 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 Y_RNA.654-201ENST00000497848 106 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC104383.1-201ENST00000530297 370 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 CBX3P8-201ENST00000532412 525 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC025423.5-201ENST00000550230 219 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AL390123.1-201ENST00000603216 237 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC092747.3-201ENST00000603769 301 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 SNRPGP20-201ENST00000604477 205 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 AC007684.1-201ENST00000609671 477 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 SCARNA4-201ENST00000629045 128 ntBASIC1.04□□□□□ -2.24
SMCO2A6NFE2 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 SNORD115-8-201ENST00000363856 82 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 SNORD115-38-201ENST00000365037 82 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 RNU6-417P-201ENST00000384712 107 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 RNA5SP504-201ENST00000410676 117 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 RNU6-221P-201ENST00000459541 99 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC025647.1-201ENST00000517879 253 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC104576.1-201ENST00000524225 88 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 Z99497.2-201ENST00000603634 310 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC021506.2-201ENST00000612354 169 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC006001.4-201ENST00000622243 395 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC099654.5-201ENST00000636479 350 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 AC121333.1-201ENST00000567488 2709 ntBASIC1.03□□□□□ -2.24
SMCO2A6NFE2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.381-201ENST00000365666 102 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 MIR514A2-201ENST00000385131 88 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 MIR514A3-201ENST00000385132 88 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNA5SP109-201ENST00000391010 116 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 MIR450B-201ENST00000401182 78 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU6-325P-201ENST00000411132 105 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AL606517.2-201ENST00000442855 241 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU7-57P-201ENST00000459540 60 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU6-1208P-201ENST00000459588 107 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 SNORA31.10-201ENST00000516482 106 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms