Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 MIR488-201ENST00000365739 83 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 MIR181B1-201ENST00000385240 110 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 AC026726.1-201ENST00000512859 601 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 RNU6-638P-201ENST00000516582 104 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 AL442128.1-201ENST00000615151 90 ntBASIC4.3□□□□□ -1.72
RCCD1A6NED2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RCCD1A6NED2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RCCD1A6NED2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RCCD1A6NED2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.29□□□□□ -1.72
RCCD1A6NED2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.29□□□□□ -1.72
RCCD1A6NED2 AL049781.1-201ENST00000623195 3585 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 RNU1-105P-201ENST00000363470 161 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 Y_RNA.242-201ENST00000364473 110 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 MIR767-201ENST00000390228 109 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
RCCD1A6NED2 AL133162.1-201ENST00000463228 453 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC021205.2-201ENST00000480069 347 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 HMGN1P7-201ENST00000491722 313 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC099522.1-202ENST00000514718 367 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 SCARNA15-202ENST00000516881 127 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC062037.1-201ENST00000605302 128 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC090115.4-201ENST00000609970 188 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC006111.3-201ENST00000622137 383 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC011944.2-201ENST00000624440 683 ntBASIC4.29□□□□□ -1.72
RCCD1A6NED2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RCCD1A6NED2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RCCD1A6NED2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 RNU6-486P-201ENST00000363116 107 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 RNA5SP447-201ENST00000363749 119 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 Y_RNA.213-201ENST00000364178 111 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 SNORA62-201ENST00000365493 153 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 MIR759-201ENST00000390224 91 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 RNU6-1275P-201ENST00000391087 107 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 SNORD77.3-201ENST00000391113 65 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 RPL23AP46-201ENST00000438548 490 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 RAC1P2-201ENST00000511164 579 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 RNU6-586P-201ENST00000517265 104 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 IGKV3-31-201ENST00000523109 329 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 TVP23BP1-201ENST00000557500 617 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 MIR4277-201ENST00000578298 84 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 AL356218.2-201ENST00000605264 187 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 Y_RNA.818-201ENST00000618813 71 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 MIR6810-201ENST00000622701 70 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 IPO8P1-201ENST00000455509 3109 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RCCD1A6NED2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 Z82217.1-201ENST00000625157 8149 ntBASIC4.28□□□□□ -1.72
RCCD1A6NED2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RCCD1A6NED2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RCCD1A6NED2 RNA5SP173-201ENST00000364857 136 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 Y_RNA.362-201ENST00000365518 110 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 AL117342.1-201ENST00000404861 406 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 RNU2-32P-201ENST00000411193 191 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 RPS26P48-201ENST00000491713 339 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 RNU6-693P-201ENST00000516134 107 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 MIR5009-201ENST00000578736 100 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 VN1R85P-201ENST00000601587 426 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 MIR2052-201ENST00000636055 55 ntBASIC4.27□□□□□ -1.73
RCCD1A6NED2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RCCD1A6NED2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RCCD1A6NED2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RCCD1A6NED2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.26□□□□□ -1.73
RCCD1A6NED2 RNU1-18P-201ENST00000363062 164 ntBASIC4.26□□□□□ -1.73
RCCD1A6NED2 MIR590-201ENST00000385008 97 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms