Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC093019.1-201ENST00000443135 252 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC093850.1-201ENST00000454121 251 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 MTND1P12-201ENST00000455231 147 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC008628.2-201ENST00000502605 298 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC016632.1-201ENST00000503994 196 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 RNU7-51P-201ENST00000516560 62 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 RNU6-201P-201ENST00000517100 61 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC022523.2-201ENST00000561045 150 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC009712.1-201ENST00000564938 316 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 MIR5692A1-201ENST00000580523 69 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC008521.1-201ENST00000587471 187 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC005776.1-201ENST00000603164 290 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 Z99497.2-201ENST00000603634 310 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC007014.2-201ENST00000615581 479 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 AC006386.1-201ENST00000619436 415 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 SNORA43.4-201ENST00000629559 138 ntBASIC-0.14□□□□□ -2.43
TRAV17A0A0B4J275 RNA5SP214-201ENST00000363378 118 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 SNORA36A-201ENST00000384221 132 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 MIR518A1-201ENST00000385068 85 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 MIR208B-201ENST00000401172 77 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 CDK8P2-201ENST00000415020 547 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AC073261.1-201ENST00000429409 121 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AL606489.2-201ENST00000433886 234 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AC117522.1-201ENST00000509821 380 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 AL078595.3-201ENST00000623815 1166 ntBASIC-0.15□□□□□ -2.43
TRAV17A0A0B4J275 RNU6-428P-201ENST00000362942 107 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-723P-201ENST00000383973 107 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MIR573-201ENST00000384964 99 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC079382.1-201ENST00000493346 557 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC010469.2-201ENST00000496412 480 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC010486.2-201ENST00000505572 483 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC091874.1-201ENST00000511402 339 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MTCO3P27-201ENST00000514397 196 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 SNORD111.1-201ENST00000516421 86 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC109479.2-201ENST00000517842 174 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AF235103.2-201ENST00000525753 346 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC013828.2-201ENST00000532487 235 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MTND4LP25-201ENST00000570218 163 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MTATP6P25-201ENST00000574491 261 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MTND3P19-201ENST00000603825 345 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AL162730.1-201ENST00000605734 292 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC122133.1-201ENST00000613964 233 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AC092634.7-201ENST00000621022 103 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 AL359697.1-201ENST00000624879 587 ntBASIC-0.16□□□□□ -2.44
TRAV17A0A0B4J275 MIR18A-201ENST00000362310 71 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 SNORD114-5-201ENST00000362928 70 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-25P-201ENST00000383873 107 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-48P-201ENST00000384161 107 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-35P-201ENST00000384530 107 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-15P-201ENST00000384534 107 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-29P-201ENST00000384637 107 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-57P-201ENST00000411348 103 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 AC012306.1-201ENST00000423267 114 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 CALM2P4-201ENST00000430810 426 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 MIR3118-1-201ENST00000581787 76 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 uc_338.34-201ENST00000617467 174 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV17A0A0B4J275 SNORA25.3-201ENST00000363205 127 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 RNA5SP517-201ENST00000364724 117 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 SNORA24.1-201ENST00000384401 135 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 U8.16-201ENST00000391279 133 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 SNORD111-201ENST00000408139 94 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 MIR1253-201ENST00000408273 105 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AL663109.1-201ENST00000411498 844 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 RPS3AP3-201ENST00000411933 242 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AC090960.1-201ENST00000421072 306 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-685P-201ENST00000517088 95 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AC025647.1-201ENST00000517879 253 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AC023050.3-201ENST00000541142 333 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 RPL23AP91-201ENST00000569211 455 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AL357075.2-201ENST00000614906 189 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 AL356596.1-201ENST00000624230 379 ntBASIC-0.18□□□□□ -2.44
TRAV17A0A0B4J275 MIR586-201ENST00000385035 97 ntBASIC-0.19□□□□□ -2.44
TRAV17A0A0B4J275 RNU6-994P-201ENST00000410507 111 ntBASIC-0.19□□□□□ -2.44
TRAV17A0A0B4J275 AL117339.3-201ENST00000418733 162 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms