Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-227P-201ENST00000362865 103 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 SNORD12-201ENST00000391002 90 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MTCYBP8-201ENST00000422855 651 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MTND5P15-201ENST00000434246 349 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC002429.1-201ENST00000437672 148 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AL031667.1-201ENST00000440222 725 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 SNRPGP9-201ENST00000456025 225 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC022364.2-201ENST00000457963 554 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU7-138P-201ENST00000459479 64 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU7-57P-201ENST00000459540 60 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AF186996.7-201ENST00000492781 209 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-1146P-201ENST00000516282 102 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-197P-201ENST00000516680 100 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 RNU7-128P-201ENST00000517247 62 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 HIF1AP1-201ENST00000553642 175 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MIR3913-1-201ENST00000577744 102 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC234772.3-201ENST00000602277 528 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC064836.2-201ENST00000609491 462 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 MIR8054-201ENST00000620877 86 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 AC106754.2-201ENST00000623006 233 ntBASIC0.54□□□□□ -2.32
TRAV41A0A0B4J266 Y_RNA.124-201ENST00000363339 93 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 Y_RNA.159-201ENST00000363674 87 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-1286P-201ENST00000383871 107 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 MIR200A-201ENST00000384875 90 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 MIR586-201ENST00000385035 97 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 SNORD41-201ENST00000386967 70 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNA5SP323-201ENST00000391094 133 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 MIR450B-201ENST00000401182 78 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNA5SP494-201ENST00000410653 129 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNA5SP504-201ENST00000410676 117 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNA5SP247-201ENST00000411181 105 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-1054P-201ENST00000411293 104 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 MTND2P18-201ENST00000419962 1030 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC063976.4-201ENST00000421971 163 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 PDCD5P2-201ENST00000507570 312 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC025465.4-201ENST00000513422 638 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC025647.1-201ENST00000517879 253 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AL590705.4-201ENST00000532209 134 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 SUB1P2-201ENST00000556401 297 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AL391840.1-201ENST00000571144 367 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 MIR3915-201ENST00000578518 97 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC080078.2-201ENST00000603766 501 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC087683.2-201ENST00000611384 326 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 HULC.1-201ENST00000612720 240 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 AC008873.1-201ENST00000625051 138 ntBASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV41A0A0B4J266 FGF7P2-201ENST00000332473 296 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AF228730.1-201ENST00000397972 663 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 MIR1253-201ENST00000408273 105 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 MTCO2P11-201ENST00000431069 680 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC245047.7-201ENST00000440265 293 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AL356010.1-201ENST00000456364 102 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC007215.1-201ENST00000464893 276 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 RPS26P48-201ENST00000491713 339 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC105758.1-201ENST00000506038 399 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC010493.1-201ENST00000513479 292 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 SNORD79.1-201ENST00000516069 84 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC011604.1-201ENST00000545978 196 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AL137100.2-201ENST00000555786 315 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 MIR3941-201ENST00000582572 103 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC146944.4-201ENST00000602697 718 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AL050303.3-201ENST00000613704 284 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC122133.1-201ENST00000613964 233 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 AC007494.3-201ENST00000624660 743 ntBASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV41A0A0B4J266 Y_RNA.123-201ENST00000363338 102 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1317P-201ENST00000364582 104 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-969P-201ENST00000383900 105 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-517P-201ENST00000384362 110 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-950P-201ENST00000384651 107 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-440P-201ENST00000390882 105 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNA5SP219-201ENST00000390940 113 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AC245047.3-201ENST00000429428 127 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms