Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC100830.2-201ENST00000581636 240 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AP001330.5-201ENST00000607176 411 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AP000770.2-201ENST00000623694 100 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-545P-201ENST00000362681 104 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-418P-201ENST00000384035 107 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-975P-201ENST00000384296 105 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORD116-8-201ENST00000384365 95 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR194-1-201ENST00000384892 85 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR586-201ENST00000385035 97 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNA5SP494-201ENST00000410653 129 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL359672.1-201ENST00000442302 409 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 BET1P1-201ENST00000482276 359 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC005840.1-201ENST00000498412 377 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC091435.1-201ENST00000505442 584 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC091133.4-201ENST00000511142 308 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR5583-1-201ENST00000580941 59 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC007684.1-201ENST00000609671 477 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC126177.8-201ENST00000618339 1015 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC073534.2-201ENST00000620377 381 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC078883.4-201ENST00000623218 367 ntBASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
COMMD3-BMI1R4GMX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-214P-201ENST00000384130 107 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNRPEP10-201ENST00000420249 274 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC060773.1-201ENST00000421698 310 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC073910.1-201ENST00000445047 438 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 NFU1P2-201ENST00000448700 469 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 RPS26P45-201ENST00000471748 340 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC083798.1-201ENST00000472671 131 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNA5SP384-201ENST00000516615 116 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-323P-201ENST00000521915 107 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR4709-201ENST00000577272 72 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL365434.2-201ENST00000607979 234 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR8076-201ENST00000611401 83 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR338-201ENST00000636369 67 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC121333.1-201ENST00000567488 2709 ntBASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-534P-201ENST00000364877 106 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORD73A-201ENST00000386062 65 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC004386.2-201ENST00000441858 148 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 MTCO1P29-201ENST00000496868 288 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 SNORD116-28-201ENST00000516123 91 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR5006-201ENST00000583027 110 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 Z99497.2-201ENST00000603634 310 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
COMMD3-BMI1R4GMX3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-784P-201ENST00000384330 106 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 EIF4E2P1-201ENST00000393781 255 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL606489.2-201ENST00000433886 234 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 HSPE1P13-201ENST00000451143 297 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNU6-344P-201ENST00000516635 111 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 RNA5SP54-201ENST00000516951 92 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.01□□□□□ -2.25
COMMD3-BMI1R4GMX3 DEFB131C-201ENST00000528817 165 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms