Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-835P-201ENST00000516974 104 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1□□□□□ -2.25
LRRC42Q9Y546 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1□□□□□ -2.25
LRRC42Q9Y546 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1□□□□□ -2.25
LRRC42Q9Y546 FGF7P1-201ENST00000582820 288 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 AP000907.4-201ENST00000604143 237 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 AC104458.1-201ENST00000608243 463 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 FAM157A-202ENST00000615155 405 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 AC068792.1-201ENST00000621354 417 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 AL359697.1-201ENST00000624879 587 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 OR5AK4P-201ENST00000635912 903 ntBASIC1□□□□□ -2.25
LRRC42Q9Y546 snoU2-30.2-201ENST00000362805 70 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-457P-201ENST00000363999 107 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-1322P-201ENST00000364309 107 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-331P-201ENST00000384724 107 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 MIR450B-201ENST00000401182 78 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-648P-201ENST00000410190 107 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RPL23AP36-201ENST00000413895 458 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 USP9YP14-201ENST00000430663 563 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 MRPS10P2-201ENST00000431226 381 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 MTCO2P16-201ENST00000436962 677 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AC073910.1-201ENST00000445047 438 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 NFU1P2-201ENST00000448700 469 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AC007215.1-201ENST00000464893 276 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-948P-201ENST00000516374 107 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.99□□□□□ -2.25
LRRC42Q9Y546 CPDP1-201ENST00000579660 283 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.99□□□□□ -2.25
LRRC42Q9Y546 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
LRRC42Q9Y546 RNU6-522P-201ENST00000364497 107 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 RNU6-534P-201ENST00000364877 106 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 SNORA72.2-201ENST00000365028 127 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 RNU6-1119P-201ENST00000384349 108 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 RNU6-1065P-201ENST00000384513 106 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MIR586-201ENST00000385035 97 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MTCO1P20-201ENST00000425366 358 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MTND3P16-201ENST00000452205 344 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 snoU13.23-201ENST00000458863 104 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AC114982.1-201ENST00000469402 321 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AC091885.1-201ENST00000506658 268 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 AL158211.1-201ENST00000566763 763 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MIR4742-201ENST00000581069 85 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MIR8076-201ENST00000611401 83 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 SCARNA4-201ENST00000629045 128 ntBASIC0.98□□□□□ -2.25
LRRC42Q9Y546 MTND4P5-201ENST00000435821 1374 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 RNU1-22P-201ENST00000363334 158 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 SNORA67.2-201ENST00000384300 149 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 RNU6-784P-201ENST00000384330 106 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 MIR487A-201ENST00000385009 80 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 EIF4E2P1-201ENST00000393781 255 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 SNRPEP10-201ENST00000420249 274 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 EIF1P1-201ENST00000421436 341 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 PGBD4P5-201ENST00000445958 426 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 MTCO1P29-201ENST00000496868 288 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 DNAJC19P9-201ENST00000555084 351 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC100830.2-201ENST00000581636 240 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AL353770.2-201ENST00000620024 78 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC006001.4-201ENST00000622243 395 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC008873.1-201ENST00000625051 138 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 AC121333.1-201ENST00000567488 2709 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
LRRC42Q9Y546 MTND5P35-201ENST00000557537 1720 ntBASIC0.97□□□□□ -2.25
LRRC42Q9Y546 MTND5P26-201ENST00000426018 1752 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AP000568.1-201ENST00000282964 442 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 RNU6-1305P-201ENST00000364353 104 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.287-201ENST00000364853 94 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 RNU6-214P-201ENST00000384130 107 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 MIR521-1-201ENST00000384902 87 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AC016909.1-201ENST00000415916 166 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.96□□□□□ -2.26
LRRC42Q9Y546 RNU6-1332P-201ENST00000516666 104 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AC015712.3-201ENST00000559380 164 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 MIR3611-201ENST00000584484 83 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AC146944.4-201ENST00000602697 718 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 RN7SKP299-201ENST00000606679 301 ntBASIC0.96□□□□□ -2.26
LRRC42Q9Y546 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.96□□□□□ -2.26
LRRC42Q9Y546 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms