Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MIR586-201ENST00000385035 97 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 SNORD41-201ENST00000386967 70 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MIR1253-201ENST00000408273 105 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 AC004866.1-201ENST00000411748 78 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 CDK8P2-201ENST00000415020 547 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MTCO2P3-201ENST00000442543 421 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 RPS29P15-201ENST00000458329 171 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 RNA5SP255-201ENST00000516370 107 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 RNU1-142P-201ENST00000516682 145 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 AL137100.2-201ENST00000555786 315 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MIR5000-201ENST00000577717 103 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 MIR4714-201ENST00000580728 77 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 AC146944.4-201ENST00000602697 718 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 AL603839.4-201ENST00000624658 1005 ntBASIC0.52□□□□□ -2.33
HDGFL3Q9Y3E1 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU5B-2P-201ENST00000363036 113 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU4-76P-201ENST00000364509 141 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU4-48P-201ENST00000365559 182 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 MIR1-2-201ENST00000384961 85 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 MIR1287-201ENST00000408492 90 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RPS3AP3-201ENST00000411933 242 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 MTND3P17-201ENST00000416968 344 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AC009541.1-201ENST00000438279 2662 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AC074290.1-201ENST00000448883 135 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 SCARNA18-201ENST00000459004 134 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 HMGB1P29-201ENST00000505659 499 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-311P-201ENST00000516224 102 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-323P-201ENST00000521915 107 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AP003461.1-201ENST00000528866 78 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 MIR3682-201ENST00000581338 84 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AL022161.1-201ENST00000604390 213 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AL359075.3-201ENST00000613288 217 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AC106754.2-201ENST00000623006 233 ntBASIC0.51□□□□□ -2.33
HDGFL3Q9Y3E1 AC068700.1-201ENST00000565862 3754 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 MIR660-201ENST00000385235 97 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-440P-201ENST00000390882 105 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 MIR942-201ENST00000401111 86 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-57P-201ENST00000411348 103 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC009961.2-201ENST00000435771 251 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 MTCO3P8-201ENST00000453691 755 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 RNU7-57P-201ENST00000459540 60 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 APOOP3-201ENST00000536787 586 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC068790.6-201ENST00000602558 258 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC068790.2-201ENST00000602601 557 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC080078.2-201ENST00000603766 501 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC097065.2-201ENST00000608159 533 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 AC073349.3-201ENST00000617616 186 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
HDGFL3Q9Y3E1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-1305P-201ENST00000364353 104 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 RNY4P34-201ENST00000364779 95 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 SNORA67.2-201ENST00000384300 149 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 MRPL42P3-201ENST00000401492 326 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AL034345.1-201ENST00000407768 123 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 MTCO2P34-201ENST00000421994 607 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 RPS29P27-201ENST00000463711 170 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC007215.1-201ENST00000464893 276 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 MTND2P14-201ENST00000482139 351 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC025647.1-201ENST00000517879 253 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC004584.2-201ENST00000570407 410 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 BNIP3P39-201ENST00000601077 554 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AL078603.1-201ENST00000603824 313 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AP000907.4-201ENST00000604143 237 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-85P-201ENST00000605989 107 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC006566.1-201ENST00000608943 513 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 AC104465.1-201ENST00000611365 139 ntBASIC0.49□□□□□ -2.33
HDGFL3Q9Y3E1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 MTND4P4-201ENST00000439033 1366 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC245047.3-201ENST00000429428 127 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC005002.2-201ENST00000438228 269 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 RNU7-167P-201ENST00000459160 62 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 RNU7-21P-201ENST00000459430 62 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC010493.1-201ENST00000513479 292 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 RNA5SP220-201ENST00000516298 104 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 RNU7-128P-201ENST00000517247 62 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC090049.2-201ENST00000550377 109 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AL353765.1-201ENST00000605514 183 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms