Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC073901.1-201ENST00000462471 408 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 RNU6-567P-201ENST00000516746 107 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 UBL5P4-201ENST00000562584 236 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 AC090617.3-201ENST00000573670 475 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 MIR3923-201ENST00000579521 83 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 MIR3117-201ENST00000584034 78 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 VN1R91P-201ENST00000594377 169 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 RPL30P11-203ENST00000598995 310 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
SIX4Q9UIU6 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
SIX4Q9UIU6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SIX4Q9UIU6 AC010329.5-201ENST00000623497 2174 ntBASIC2.33□□□□□ -2.04
SIX4Q9UIU6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.455-201ENST00000384230 98 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 RNU6-823P-201ENST00000391042 103 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 RNU6-985P-201ENST00000410182 104 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC114482.1-201ENST00000418010 247 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AL590556.1-201ENST00000423231 483 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC107032.1-201ENST00000485945 480 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC132942.1-201ENST00000486753 483 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC145146.1-201ENST00000496370 254 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 RNU6-764P-201ENST00000516396 105 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 SNORA40.14-201ENST00000516543 86 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 RNU6-58P-201ENST00000517143 103 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.720-201ENST00000517166 92 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC113195.1-201ENST00000579952 141 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC136443.5-201ENST00000603741 370 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AL138825.1-201ENST00000618587 192 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 AC137590.2-201ENST00000619709 240 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 MIR6873-201ENST00000622788 63 ntBASIC2.32□□□□□ -2.04
SIX4Q9UIU6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SIX4Q9UIU6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.389-201ENST00000383924 113 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 MIR10B-201ENST00000385011 110 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RNA5SP213-201ENST00000391031 106 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 SNORA46.1-201ENST00000391069 153 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 SNORA12-201ENST00000391162 147 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RNU1-139P-201ENST00000391307 165 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 DPH3P2-201ENST00000422618 250 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 MICF-203ENST00000432679 129 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RPS29P21-201ENST00000496272 170 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC022868.1-201ENST00000517767 391 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC040926.1-201ENST00000530195 238 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC105245.1-201ENST00000581934 244 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC005520.5-201ENST00000613926 164 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
SIX4Q9UIU6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SIX4Q9UIU6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 U8.2-201ENST00000363156 134 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.153-201ENST00000363615 91 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SNORD115-8-201ENST00000363856 82 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SNORD115-38-201ENST00000365037 82 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SNORD14.1-201ENST00000365609 90 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.424-201ENST00000384063 103 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.459-201ENST00000384251 102 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 RN7SKP192-201ENST00000411291 327 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 EIF1P2-201ENST00000428233 350 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 WARS2P1-201ENST00000429678 537 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 MTND5P22-201ENST00000458380 195 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 MTATP8P1-201ENST00000467115 207 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 RNU6-911P-201ENST00000516523 104 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 SCARNA3-201ENST00000517097 143 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 MIR5695-201ENST00000579717 85 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms