Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OR2AQ1P-201ENST00000451972 200 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 RNU7-169P-201ENST00000459456 61 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 RNA5SP281-201ENST00000516504 135 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 RNU6-567P-201ENST00000516746 107 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.701-201ENST00000516812 110 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 DEFB131C-201ENST00000528817 165 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 UBL5P4-201ENST00000562584 236 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
NDE1Q9NXR1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
NDE1Q9NXR1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 ZNF72P-201ENST00000425869 1908 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 RNU6-743P-201ENST00000364151 106 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 SNORD42.2-201ENST00000365570 69 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 RNU6-474P-201ENST00000384243 107 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 RNU6-17P-201ENST00000384245 107 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 RNU6-18P-201ENST00000384527 107 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 MIR29B2-201ENST00000385055 81 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 MIR190B-201ENST00000401119 79 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 MTND4P28-201ENST00000426217 387 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 U8.22-201ENST00000459141 133 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AP000870.1-201ENST00000472927 406 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AC027288.2-201ENST00000553028 243 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AC104581.2-201ENST00000572227 430 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 7SK.7-201ENST00000603504 247 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 AC100812.1-201ENST00000607622 580 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.93□□□□□ -2.1
NDE1Q9NXR1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NDE1Q9NXR1 ZNF204P-201ENST00000416749 2397 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 RNU6-490P-201ENST00000362985 107 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 U3.9-201ENST00000363823 204 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 SNORD115-32-201ENST00000364079 82 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.216-201ENST00000364205 93 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 SNORD32B-201ENST00000364460 84 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 SNORA18.2-201ENST00000383865 132 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MIR153-2-201ENST00000385225 87 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC007098.1-201ENST00000420122 367 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MTCYBP10-201ENST00000424905 650 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 SUB1P3-201ENST00000564581 315 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC090517.1-201ENST00000569307 266 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC044792.1-201ENST00000593294 196 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 RMST_6.1-201ENST00000611980 203 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC005520.5-201ENST00000613926 164 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 uc_338.22-201ENST00000622722 187 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.92□□□□□ -2.1
NDE1Q9NXR1 MTND5P16-201ENST00000460269 1703 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
NDE1Q9NXR1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 RNU6-541P-201ENST00000384709 110 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 RNU2-32P-201ENST00000411193 191 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC004866.1-201ENST00000411748 78 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.91□□□□□ -2.1
NDE1Q9NXR1 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AL137792.2-201ENST00000443484 235 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC010095.1-201ENST00000443543 144 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 CHEK2P4-201ENST00000450340 246 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC007485.1-201ENST00000616755 206 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC087588.2-201ENST00000617667 426 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AL590808.1-201ENST00000618696 141 ntBASIC1.91□□□□□ -2.1
NDE1Q9NXR1 AC008121.3-201ENST00000618726 433 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms