Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 BNIP3P10-201ENST00000605360 577 ntBASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 AC007014.2-201ENST00000615581 479 ntBASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 U6atac.1-201ENST00000616025 117 ntBASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 AC027514.1-201ENST00000588561 1603 ntBASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
CHCHD3Q9NX63 U8.2-201ENST00000363156 134 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU6-112P-201ENST00000363599 104 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU6-17P-201ENST00000384245 107 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU6-18P-201ENST00000384527 107 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 MIR520A-201ENST00000384862 85 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AC008134.1-201ENST00000420943 193 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 MTND1P4-201ENST00000435196 415 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 SNORD5.1-201ENST00000458800 75 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AC025465.3-201ENST00000510570 311 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU7-175P-201ENST00000515915 61 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 RNU6-58P-201ENST00000517143 103 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AC104581.2-201ENST00000572227 430 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AC009248.2-201ENST00000619826 254 ntBASIC1.78□□□□□ -2.12
CHCHD3Q9NX63 AL356292.1-201ENST00000283110 373 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 Y_RNA.301-201ENST00000364990 103 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNU6-541P-201ENST00000384709 110 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AL356776.1-201ENST00000406574 447 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RN7SKP51-201ENST00000410781 304 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNU6-1148P-201ENST00000410992 104 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNU6-329P-201ENST00000459618 107 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 TRBV12-1-201ENST00000479785 344 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC011406.1-201ENST00000512440 370 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNU4-49P-201ENST00000516080 140 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 RNU6-1088P-201ENST00000516850 104 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AL590705.4-201ENST00000532209 134 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 MIR4790-201ENST00000577799 79 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC013412.1-201ENST00000610687 192 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 AC098679.4-201ENST00000624241 654 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 MIR219B-201ENST00000637023 88 ntBASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CHCHD3Q9NX63 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 RNU6-418P-201ENST00000384035 107 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 SNORA67.2-201ENST00000384300 149 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 MTCO3P29-201ENST00000432119 779 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AC010409.1-201ENST00000487382 476 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 RPL30P10-201ENST00000488148 337 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 RNU6-358P-201ENST00000516564 75 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AC027288.2-201ENST00000553028 243 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.76□□□□□ -2.13
CHCHD3Q9NX63 AC010615.1-201ENST00000594254 1764 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RNU6-595P-201ENST00000363944 107 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RNU6-1305P-201ENST00000364353 104 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC004866.1-201ENST00000411748 78 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 MTND3P8-201ENST00000412909 339 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC009963.1-201ENST00000417265 157 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RPL21P111-201ENST00000418453 477 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 HMGN1P13-201ENST00000505795 138 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC046134.1-201ENST00000514454 666 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RNU6-1016P-201ENST00000516689 94 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 RNU6-273P-201ENST00000516937 96 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 SNORA31.17-201ENST00000516953 127 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC122108.2-201ENST00000611946 526 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 snoZ196.1-201ENST00000625269 89 ntBASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
CHCHD3Q9NX63 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 snoU2-30.2-201ENST00000362805 70 ntBASIC1.74□□□□□ -2.13
CHCHD3Q9NX63 Y_RNA.86-201ENST00000363020 111 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms