Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC124312.5-201ENST00000604451 268 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 SNORD115-3-201ENST00000363100 82 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 RNU6-418P-201ENST00000384035 107 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.526-201ENST00000384572 110 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.527-201ENST00000384573 102 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 AC016717.1-201ENST00000448918 286 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 AC093852.1-201ENST00000503587 266 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 MIR4659A-201ENST00000580269 81 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 AC093732.2-201ENST00000607950 274 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIN7CQ9NUP9 AC096644.4-201ENST00000563417 2912 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 MIR26A1-201ENST00000362205 77 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 RNU6-975P-201ENST00000384296 105 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 SNORD14D-201ENST00000384390 87 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 MIR548B-201ENST00000385247 97 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 RNU6-101P-201ENST00000410323 104 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 ELOCP21-201ENST00000412558 336 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 SDAD1P3-201ENST00000427380 333 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 S100A11P2-201ENST00000467589 312 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 RN7SL297P-201ENST00000483161 293 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 RNU6-408P-201ENST00000515910 100 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC022616.4-201ENST00000522985 181 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC022080.3-201ENST00000544433 482 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC018448.1-201ENST00000552843 316 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AL390123.1-201ENST00000603216 237 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 AC240442.1-201ENST00000616055 283 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LIN7CQ9NUP9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 RNU4-50P-201ENST00000364361 141 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC139712.2-201ENST00000424302 339 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AL139109.1-201ENST00000455491 297 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 RNU7-57P-201ENST00000459540 60 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC114982.1-201ENST00000469402 321 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC074133.1-201ENST00000515696 183 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 AC006504.6-201ENST00000590142 199 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.34□□□□□ -2.03
LIN7CQ9NUP9 MIR340-201ENST00000362125 95 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 U3.8-201ENST00000363675 217 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 RNU6-961P-201ENST00000363893 105 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.455-201ENST00000384230 98 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.471-201ENST00000384312 102 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 MIR606-201ENST00000384851 96 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 AL139095.1-201ENST00000404326 391 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 MTCO1P44-201ENST00000441935 243 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 AC074290.1-201ENST00000448883 135 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 RNU6-625P-201ENST00000459412 107 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 RPL26P26-201ENST00000480251 434 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 SCARNA15.1-201ENST00000516384 125 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 RNA5SP137-201ENST00000516833 135 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.715-201ENST00000517082 110 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 MIR3200-201ENST00000580767 85 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 AL121655.1-201ENST00000605811 308 ntBASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LIN7CQ9NUP9 LINC02555-201ENST00000563933 1951 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 MIR128-1-201ENST00000384921 82 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 MRPL35P1-201ENST00000404272 572 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 RN7SKP284-201ENST00000411002 343 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AC113618.1-201ENST00000416747 285 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 NDUFB4P10-201ENST00000452541 359 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 RNU6-948P-201ENST00000516374 107 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 RNU6-826P-201ENST00000516827 104 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms