Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 MTND1P11-201ENST00000456661 876 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC026371.1-201ENST00000551867 419 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.74□□□□□ -2.13
HPS4Q9NQG7 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC010928.2-201ENST00000588017 287 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AC009033.1-201ENST00000624279 431 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 AL133216.2-202ENST00000634512 349 ntBASIC1.74□□□□□ -2.13
HPS4Q9NQG7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
HPS4Q9NQG7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 MIR340-201ENST00000362125 95 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNU5B-2P-201ENST00000363036 113 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 MT-TL1-201ENST00000386347 75 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 SNORA48.1-201ENST00000390879 135 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNU6-876P-201ENST00000391295 104 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNU6-321P-201ENST00000410912 106 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNU1-131P-201ENST00000458943 161 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNA5SP57-201ENST00000459463 123 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 MTCO1P29-201ENST00000496868 288 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 MRPS36P4-201ENST00000534436 298 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RPL17P51-201ENST00000605218 238 ntBASIC1.73□□□□□ -2.13
HPS4Q9NQG7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.73□□□□□ -2.13
HPS4Q9NQG7 RNU6-562P-201ENST00000362731 107 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RNU1-76P-201ENST00000362903 159 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 SNORD31B-201ENST00000364977 69 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RNU6-1286P-201ENST00000383871 107 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RNU6-128P-201ENST00000383976 107 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 MIR521-1-201ENST00000384902 87 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 AC139712.2-201ENST00000424302 339 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RNU6-329P-201ENST00000459618 107 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RPS23P5-201ENST00000495419 428 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 AC096745.1-201ENST00000509945 370 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 MIR4742-201ENST00000581069 85 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 FGF7P1-201ENST00000582820 288 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 MIR8076-201ENST00000611401 83 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 AC093913.1-201ENST00000614178 329 ntBASIC1.72□□□□□ -2.13
HPS4Q9NQG7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HPS4Q9NQG7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HPS4Q9NQG7 CBX3P1-201ENST00000325243 554 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.151-201ENST00000363566 112 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.279-201ENST00000364763 95 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.301-201ENST00000364990 103 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 SNORD116-11-201ENST00000383882 92 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 RNU6-968P-201ENST00000384076 107 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 RNA5SP494-201ENST00000410653 129 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AC130509.1-201ENST00000464158 433 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AL117351.2-201ENST00000513571 157 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.71□□□□□ -2.14
HPS4Q9NQG7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AC104581.2-201ENST00000572227 430 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.71□□□□□ -2.14
HPS4Q9NQG7 MIR4801-201ENST00000582704 82 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 MIR3976-201ENST00000606807 139 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.71□□□□□ -2.14
HPS4Q9NQG7 AC233981.2-201ENST00000611524 1614 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC245060.5-201ENST00000610778 3293 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 SNORA18.2-201ENST00000383865 132 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 RNU6-933P-201ENST00000384424 107 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 RNU6-306P-201ENST00000384617 107 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 RPS20P15-201ENST00000412792 311 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 MTCO3P46-201ENST00000425787 232 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC016925.1-201ENST00000458303 298 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 RNU7-95P-201ENST00000459222 64 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 RPL31P58-201ENST00000469001 379 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC005840.1-201ENST00000498412 377 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC116353.2-201ENST00000505332 712 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 SUB1P3-201ENST00000564581 315 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC005786.1-201ENST00000588553 154 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms