Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RPL23AP54-201ENST00000495129 419 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 RNU1-142P-201ENST00000516682 145 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 RNU6-201P-201ENST00000517100 61 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AC107934.1-201ENST00000522215 217 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AP003049.1-201ENST00000529418 457 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AL391840.1-201ENST00000571144 367 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AL162424.1-201ENST00000602325 221 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 AC100810.6-201ENST00000638068 285 ntBASIC0.08□□□□□ -2.4
LRTM1Q9HBL6 RNA5SP467-201ENST00000391274 118 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 RNU2-3P-201ENST00000410144 191 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 RNU6-607P-201ENST00000411283 108 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 MTND3P25-201ENST00000509243 135 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC116353.3-201ENST00000511215 249 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 RNU6-758P-201ENST00000516292 89 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 IGLVI-20-201ENST00000519296 130 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC022217.4-201ENST00000604389 163 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC097478.2-201ENST00000610572 514 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AL136317.1-201ENST00000612653 226 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AC006001.4-201ENST00000622243 395 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 AL157786.1-207ENST00000627771 695 ntBASIC0.07□□□□□ -2.4
LRTM1Q9HBL6 RNA5SP368-201ENST00000364298 116 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 Y_RNA.287-201ENST00000364853 94 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNU6-39P-201ENST00000384344 107 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNU6-440P-201ENST00000390882 105 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNA5SP25-201ENST00000410815 110 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNA5SP222-201ENST00000411039 105 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AC244098.3-201ENST00000424803 96 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AC117522.1-201ENST00000509821 380 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNU6-1003P-201ENST00000517099 105 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 SCARNA1-201ENST00000517138 166 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AC027419.1-201ENST00000522976 328 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AC011195.1-201ENST00000578177 177 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 Z99289.3-201ENST00000605586 594 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 AC104458.1-201ENST00000608243 463 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.06□□□□□ -2.4
LRTM1Q9HBL6 RNU4-73P-201ENST00000363164 141 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 SNORD56.2-201ENST00000363242 71 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RNU6-336P-201ENST00000364891 107 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 SNORA2.2-201ENST00000365473 135 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RNU6V-201ENST00000384105 107 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RNU6-975P-201ENST00000384296 105 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 SNORA8.3-201ENST00000384679 139 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 MRPL42P3-201ENST00000401492 326 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RNA5SP504-201ENST00000410676 117 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC114491.1-201ENST00000416095 246 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 PDCL2P1-201ENST00000419302 352 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC090960.1-201ENST00000421072 306 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC245047.3-201ENST00000429428 127 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RPL23AP50-201ENST00000434149 455 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC079382.1-201ENST00000493346 557 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RBBP4P6-201ENST00000508098 202 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 MTATP6P15-201ENST00000527233 835 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AP002001.1-203ENST00000534002 267 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 MIR4778-201ENST00000577635 80 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC073539.2-201ENST00000597113 165 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AL359075.3-201ENST00000613288 217 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 AC006386.1-201ENST00000619436 415 ntBASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.05□□□□□ -2.4
LRTM1Q9HBL6 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AC074290.1-201ENST00000448883 135 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AC016717.1-201ENST00000448918 286 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 MIR4307-201ENST00000582802 84 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 Z99497.2-201ENST00000603634 310 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AL391903.3-201ENST00000612158 163 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AL512506.1-201ENST00000613918 449 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AP000484.1-201ENST00000620067 1252 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AC091948.2-201ENST00000636510 279 ntBASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.04□□□□□ -2.4
LRTM1Q9HBL6 RNU6-25P-201ENST00000383873 107 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 RNU6-48P-201ENST00000384161 107 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 Y_RNA.465-201ENST00000384293 102 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 RNU6-15P-201ENST00000384534 107 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 RNU6-29P-201ENST00000384637 107 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 MIR549A-201ENST00000385268 96 ntBASIC0.03□□□□□ -2.4
LRTM1Q9HBL6 MIR140-201ENST00000385282 100 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms