Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RPL23AP97-201ENST00000568955 471 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 MIR8069-1-201ENST00000616627 86 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 MIR8069-2-201ENST00000621412 86 ntBASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.01□□□□□ -1.77
COL25A1Q9BXS0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 AL672167.1-204ENST00000641875 3017 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
COL25A1Q9BXS0 RNU6-600P-201ENST00000362524 99 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 RNU6-1125P-201ENST00000363601 107 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 Y_RNA.366-201ENST00000365540 102 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 RNU6-788P-201ENST00000390967 104 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 AC007064.1-201ENST00000412238 351 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 CYCSP4-201ENST00000429682 331 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 RPL27AP5-201ENST00000469428 449 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 RNU2-44P-201ENST00000516795 194 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 AC015912.2-201ENST00000571053 181 ntBASIC4□□□□□ -1.77
COL25A1Q9BXS0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL25A1Q9BXS0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4□□□□□ -1.77
COL25A1Q9BXS0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL25A1Q9BXS0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 Y_RNA.198-201ENST00000364013 98 ntBASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 AC244098.2-201ENST00000422068 99 ntBASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 AP002884.2-201ENST00000471647 395 ntBASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 SNORA31.8-201ENST00000516327 108 ntBASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL25A1Q9BXS0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 RNU1-108P-201ENST00000362556 161 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 RNU6-884P-201ENST00000363889 107 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 RNY1P1-201ENST00000364372 112 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 MIR887-201ENST00000401258 79 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC083906.5-201ENST00000503722 328 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC091178.1-203ENST00000584586 279 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL25A1Q9BXS0 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 Y_RNA.66-201ENST00000362862 102 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RNU6-497P-201ENST00000365316 104 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RNU6-242P-201ENST00000384359 107 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RPL36AP10-201ENST00000421785 322 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 HMGN2P20-201ENST00000437531 273 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RPS26P55-201ENST00000471178 356 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RPS27AP10-201ENST00000496103 208 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AC084364.2-201ENST00000546924 395 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AC007546.2-201ENST00000623996 360 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AC103988.1-201ENST00000566382 2177 ntBASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL25A1Q9BXS0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL25A1Q9BXS0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL25A1Q9BXS0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms