Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SNORD13-201ENST00000459299 104 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AL590705.4-201ENST00000532209 134 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AC133104.2-201ENST00000615272 193 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 RNU1-17P-201ENST00000363022 152 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RNU1-23P-201ENST00000363361 144 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 SNORD115-32-201ENST00000364079 82 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 SNORD32B-201ENST00000364460 84 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RNU6-1040P-201ENST00000383974 107 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RNU6-443P-201ENST00000384780 107 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SIN3AQ96ST3 SNORA12.2-201ENST00000391040 156 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 MIR208B-201ENST00000401172 77 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RPL23AP50-201ENST00000434149 455 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 snoU13.30-201ENST00000458951 104 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 MIR2053-201ENST00000459295 91 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RPL17P19-201ENST00000489069 552 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.42□□□□□ -2.02
SIN3AQ96ST3 RNU6-470P-201ENST00000515954 104 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 SNORA48.11-201ENST00000517015 89 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 AC080078.3-201ENST00000605407 463 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 AL160413.1-201ENST00000622780 310 ntBASIC2.42□□□□□ -2.02
SIN3AQ96ST3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.42□□□□□ -2.02
SIN3AQ96ST3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 MTND5P10-201ENST00000603719 1809 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 RNU6-874P-201ENST00000362390 105 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.146-201ENST00000363549 102 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 SNORA6-201ENST00000384033 151 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 RNU6-17P-201ENST00000384245 107 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.460-201ENST00000384255 102 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 RNU6-18P-201ENST00000384527 107 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 MIR32-201ENST00000384965 70 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 MTND4P28-201ENST00000426217 387 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 CYP2C59P-201ENST00000457790 269 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 TOMM22P6-201ENST00000465035 409 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 AC027575.1-201ENST00000481064 460 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 HMGN1P13-201ENST00000505795 138 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 SUB1P3-201ENST00000564581 315 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 MIR3683-201ENST00000580847 82 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 AC090574.1-201ENST00000623186 233 ntBASIC2.41□□□□□ -2.02
SIN3AQ96ST3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SIN3AQ96ST3 AC073544.1-201ENST00000600110 1595 ntBASIC2.4□□□□□ -2.02
SIN3AQ96ST3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RNU6-99P-201ENST00000364721 107 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RNA5SP190-201ENST00000365222 118 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RNU2-63P-201ENST00000410792 194 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RPS20P15-201ENST00000412792 311 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 IFNA11P-201ENST00000446352 526 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 SNORA25.15-201ENST00000516487 89 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AC018630.3-201ENST00000542637 96 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AL355802.3-201ENST00000607571 545 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 RMST_6.1-201ENST00000611980 203 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 AC008121.3-201ENST00000618726 433 ntBASIC2.4□□□□□ -2.03
SIN3AQ96ST3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SIN3AQ96ST3 U3.9-201ENST00000363823 204 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.813-201ENST00000364639 102 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 RNA5SP240-201ENST00000365355 128 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 SNORD42.2-201ENST00000365570 69 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 MIR549A-201ENST00000385268 96 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AL078595.1-201ENST00000404458 226 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AL590556.1-201ENST00000423231 483 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 IPO7P1-201ENST00000442031 636 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AC018868.1-201ENST00000491307 315 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.39□□□□□ -2.03
SIN3AQ96ST3 RNU7-175P-201ENST00000515915 61 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AC027288.2-201ENST00000553028 243 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 ANP32BP3-201ENST00000559213 706 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 MIR4255-201ENST00000579351 72 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 MIR3618-201ENST00000580330 88 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 AC016727.2-201ENST00000603988 621 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms