Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC012306.1-201ENST00000423267 114 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AL356583.2-201ENST00000426536 280 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 MTND1P20-201ENST00000430341 950 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.18□□□□□ -2.38
LYSMD1Q96S90 DAP3P1-201ENST00000441522 278 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC112204.1-201ENST00000502591 103 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC008628.2-201ENST00000502605 298 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.18□□□□□ -2.38
LYSMD1Q96S90 SNORA68.3-201ENST00000515906 83 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 SNORA70.12-201ENST00000516084 153 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC090049.2-201ENST00000550377 109 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC023827.1-201ENST00000569247 97 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AL031775.1-201ENST00000607014 887 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC005520.5-201ENST00000613926 164 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC005562.2-201ENST00000618264 111 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 SNORA43.4-201ENST00000629559 138 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC013437.2-201ENST00000639587 677 ntBASIC0.18□□□□□ -2.38
LYSMD1Q96S90 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 Y_RNA.36-201ENST00000362602 112 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 SNORD114-26-201ENST00000363543 72 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RNU4-68P-201ENST00000364314 141 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RNU4-48P-201ENST00000365559 182 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RNY1P8-201ENST00000383970 114 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 MIR193B-201ENST00000384907 83 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RPS27AP14-201ENST00000422868 454 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC004386.2-201ENST00000441858 148 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC022364.2-201ENST00000457963 554 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 U7.7-201ENST00000459276 60 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 HSPE1P23-201ENST00000509838 286 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC027419.1-201ENST00000522976 328 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AP002001.1-203ENST00000534002 267 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AL391840.1-201ENST00000571144 367 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC005730.3-201ENST00000583067 366 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC234772.3-201ENST00000602277 528 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 PRELID3BP2-201ENST00000605362 201 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AL138960.2-201ENST00000625145 535 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.17□□□□□ -2.38
LYSMD1Q96S90 AC100810.6-201ENST00000638068 285 ntBASIC0.17□□□□□ -2.38
LYSMD1Q96S90 RNU6-1305P-201ENST00000364353 104 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RNU6-550P-201ENST00000391057 101 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 MRPL42P3-201ENST00000401492 326 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RPS29P13-201ENST00000402041 169 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RNU6-1186P-201ENST00000410429 97 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AL117339.3-201ENST00000418733 162 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 MTATP6P16-201ENST00000434543 526 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 STAG3L5P-204ENST00000443759 179 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC013470.1-201ENST00000453438 462 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 USP9YP25-201ENST00000457708 443 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 MTCO2P29-201ENST00000465212 189 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC116562.3-201ENST00000506136 177 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RNU6-1220P-201ENST00000517126 108 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC068587.5-201ENST00000528506 175 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC011195.1-201ENST00000578177 177 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC091805.2-201ENST00000603848 235 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AP001836.1-201ENST00000604675 523 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AL359075.3-201ENST00000613288 217 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AL139418.1-201ENST00000613613 177 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 AL136221.1-201ENST00000621449 509 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 U6.108-201ENST00000637764 58 ntBASIC0.16□□□□□ -2.38
LYSMD1Q96S90 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
LYSMD1Q96S90 RNU6-1287P-201ENST00000362914 107 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 SNORD115-7-201ENST00000365306 82 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 RNU6-1060P-201ENST00000384664 107 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 RNU6-1242P-201ENST00000391052 103 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 RNU6-387P-201ENST00000411331 105 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 RPS3AP3-201ENST00000411933 242 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC016909.1-201ENST00000415916 166 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC104332.1-201ENST00000440471 797 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC074290.1-201ENST00000448883 135 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC093850.1-201ENST00000454121 251 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC104136.1-201ENST00000512969 394 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.15□□□□□ -2.39
LYSMD1Q96S90 LRRC34P2-201ENST00000514850 553 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 RNA5SP480-201ENST00000516840 109 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC105185.1-201ENST00000518705 535 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms