Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC091179.3-201ENST00000474761 144 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 SEPT14P8-201ENST00000508026 178 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 SERF1AP1-201ENST00000514575 187 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.21□□□□□ -1.9
ERCC4Q92889 AC009779.6-201ENST00000603972 165 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AC090115.4-201ENST00000609970 188 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ERCC4Q92889 MTND5P35-201ENST00000557537 1720 ntBASIC3.21□□□□□ -1.9
ERCC4Q92889 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.21□□□□□ -1.9
ERCC4Q92889 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ERCC4Q92889 Y_RNA.286-201ENST00000364813 102 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 RNU6-793P-201ENST00000384233 104 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 MIR549A-201ENST00000385268 96 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 SNORA48.2-201ENST00000390926 124 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 RNU2-14P-201ENST00000411053 191 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC4Q92889 AC112771.1-201ENST00000463581 102 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC4Q92889 RPL36AP48-201ENST00000485521 314 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC4Q92889 HMGB3P17-201ENST00000504195 649 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC4Q92889 AC022080.3-201ENST00000544433 482 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 EIF4A1P12-201ENST00000551910 141 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.2□□□□□ -1.9
ERCC4Q92889 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.2□□□□□ -1.9
ERCC4Q92889 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.2□□□□□ -1.9
ERCC4Q92889 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.2□□□□□ -1.9
ERCC4Q92889 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
ERCC4Q92889 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
ERCC4Q92889 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC4Q92889 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 SNORD21-201ENST00000383953 95 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 ELOCP21-201ENST00000412558 336 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 AL390729.2-201ENST00000416137 156 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC4Q92889 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC4Q92889 RPS29P26-201ENST00000477483 171 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 RPL31P41-201ENST00000477967 372 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 AC091826.1-201ENST00000514065 313 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 RRN3P3-201ENST00000549207 578 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC4Q92889 AC026470.2-201ENST00000561492 181 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.19□□□□□ -1.9
ERCC4Q92889 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 SNRPGP20-201ENST00000604477 205 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 AC011373.1-201ENST00000607270 237 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 U2.14-201ENST00000615943 113 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.19□□□□□ -1.9
ERCC4Q92889 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERCC4Q92889 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
ERCC4Q92889 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AL359854.1-201ENST00000614203 1594 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNU6-1266P-201ENST00000362794 105 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 SNORD27-201ENST00000363981 72 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNU6-338P-201ENST00000383888 105 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 Y_RNA.515-201ENST00000384535 112 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNU4-30P-201ENST00000410245 143 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AC097463.2-201ENST00000421074 142 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 EIF4EP4-201ENST00000424916 578 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.18□□□□□ -1.9
ERCC4Q92889 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.18□□□□□ -1.9
ERCC4Q92889 MRPS36P2-201ENST00000512569 299 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 DEFB131C-201ENST00000528817 165 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.18□□□□□ -1.9
ERCC4Q92889 AC018448.1-201ENST00000552843 316 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AC055872.1-201ENST00000570978 278 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
ERCC4Q92889 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.18□□□□□ -1.9
ERCC4Q92889 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.18□□□□□ -1.9
ERCC4Q92889 BX284668.6-201ENST00000606899 438 ntBASIC3.18□□□□□ -1.9
ERCC4Q92889 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ERCC4Q92889 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ERCC4Q92889 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 MIR410-201ENST00000362222 80 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 U3.9-201ENST00000363823 204 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 RNU6-200P-201ENST00000364743 107 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 SNORA46.1-201ENST00000391069 153 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AC004866.1-201ENST00000411748 78 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
ERCC4Q92889 IFNA11P-201ENST00000446352 526 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
ERCC4Q92889 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
ERCC4Q92889 AC145146.1-201ENST00000496370 254 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 MIR4643-201ENST00000577473 78 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AC011471.1-201ENST00000585766 187 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 RPL12P50-201ENST00000603116 116 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AC022441.3-201ENST00000605737 136 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 AL590240.4-201ENST00000616908 390 ntBASIC3.17□□□□□ -1.9
ERCC4Q92889 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ERCC4Q92889 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 375.7 ms