Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP43Q70EL4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP43Q70EL4 MIR449A-201ENST00000362113 91 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-326P-201ENST00000365480 107 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-72P-201ENST00000384285 79 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.568-201ENST00000384742 113 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.586-201ENST00000391146 98 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.629-201ENST00000411368 105 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC007560.1-201ENST00000426912 237 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AL139132.1-201ENST00000431587 344 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 SNORD2.1-201ENST00000458762 69 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RN7SKP210-201ENST00000459176 261 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RPL30P5-201ENST00000494923 336 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC091826.1-201ENST00000514065 313 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
USP43Q70EL4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-377P-201ENST00000515965 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-313P-201ENST00000516317 112 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-62P-201ENST00000516526 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 RNA5SP291-201ENST00000517222 105 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.47□□□□□ -2.01
USP43Q70EL4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.47□□□□□ -2.01
USP43Q70EL4 MIR4659A-201ENST00000580269 81 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 MIR3609-201ENST00000582661 80 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AC027309.3-201ENST00000623419 351 ntBASIC2.47□□□□□ -2.01
USP43Q70EL4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.47□□□□□ -2.01
USP43Q70EL4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP43Q70EL4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP43Q70EL4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
USP43Q70EL4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNU4-90P-201ENST00000362773 141 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNU6-78P-201ENST00000362897 107 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNU6-818P-201ENST00000364837 108 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNA5SP126-201ENST00000365092 109 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 Z98749.2-208ENST00000381646 500 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RNU6-318P-201ENST00000384283 103 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USP43Q70EL4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USP43Q70EL4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USP43Q70EL4 RNA5SP213-201ENST00000391031 106 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 RPL23AP36-201ENST00000413895 458 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 TOMM20P4-201ENST00000427861 435 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AL590383.1-201ENST00000428602 75 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 SNRPEP9-201ENST00000436794 238 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.46□□□□□ -2.02
USP43Q70EL4 AP001324.2-201ENST00000461163 319 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.46□□□□□ -2.02
USP43Q70EL4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.46□□□□□ -2.02
USP43Q70EL4 CYCSP39-201ENST00000565821 309 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.46□□□□□ -2.02
USP43Q70EL4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.46□□□□□ -2.02
USP43Q70EL4 AC009163.5-201ENST00000575421 637 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 MIR4423-201ENST00000580922 80 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC104984.5-201ENST00000586878 94 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC008739.2-201ENST00000597006 317 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 HSPE1P7-201ENST00000604681 321 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 U2.21-201ENST00000637295 81 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP43Q70EL4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 AC096644.4-201ENST00000563417 2912 ntBASIC2.46□□□□□ -2.02
USP43Q70EL4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USP43Q70EL4 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 UBE2WP1-201ENST00000362030 340 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 RNU6-105P-201ENST00000363909 104 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 RNU6-923P-201ENST00000364753 107 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 RNU6-44P-201ENST00000384045 107 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 Y_RNA.446-201ENST00000384178 104 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 MIR627-201ENST00000384979 97 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 MIR518D-201ENST00000385014 87 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 RNA5SP184-201ENST00000411071 108 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.45□□□□□ -2.02
USP43Q70EL4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.45□□□□□ -2.02
USP43Q70EL4 AC005002.2-201ENST00000438228 269 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 AC105272.1-201ENST00000438604 198 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 snoU109.2-201ENST00000459316 135 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.45□□□□□ -2.02
USP43Q70EL4 ANXA2P1-201ENST00000505539 926 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms