Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC018638.8-201ENST00000588755 281 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC093913.1-201ENST00000614178 329 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 SNORD115-32-201ENST00000364079 82 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CASC4Q6P4E1 RNU6-192P-201ENST00000391253 100 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.76□□□□□ -2.13
CASC4Q6P4E1 NCOR1P3-201ENST00000420479 303 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 AC016717.1-201ENST00000448918 286 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
CASC4Q6P4E1 HMGN2P9-201ENST00000476875 229 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 YWHAEP4-201ENST00000505390 198 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.76□□□□□ -2.13
CASC4Q6P4E1 AC009248.2-201ENST00000619826 254 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 AL359697.1-201ENST00000624879 587 ntBASIC1.76□□□□□ -2.13
CASC4Q6P4E1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 RNU6-862P-201ENST00000362804 105 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 SNORD115-8-201ENST00000363856 82 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 SNORD115-38-201ENST00000365037 82 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 AC060773.1-201ENST00000421698 310 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 snoU13.26-201ENST00000459452 105 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 RPL30P10-201ENST00000488148 337 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 CBX3P4-201ENST00000538909 354 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 HSBP1P1-201ENST00000555205 166 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 MIR4298-201ENST00000584380 73 ntBASIC1.75□□□□□ -2.13
CASC4Q6P4E1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CASC4Q6P4E1 AL356292.1-201ENST00000283110 373 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU6-975P-201ENST00000384296 105 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 SNORA67.2-201ENST00000384300 149 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AL117342.1-201ENST00000404861 406 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU6-174P-201ENST00000410406 106 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC243428.1-201ENST00000421099 264 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AL121890.1-201ENST00000435457 205 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 snoU13.30-201ENST00000458951 104 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU6-329P-201ENST00000459618 107 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RPL23AP63-201ENST00000498752 471 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU2-34P-201ENST00000516534 121 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNA5SP54-201ENST00000516951 92 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 RNU6-58P-201ENST00000517143 103 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AF235103.2-201ENST00000525753 346 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC027288.2-201ENST00000553028 243 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC104581.2-201ENST00000572227 430 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AL158827.2-201ENST00000602494 330 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC080078.2-201ENST00000603766 501 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 MIR6128-201ENST00000615528 109 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AC098679.4-201ENST00000624241 654 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AL691447.3-201ENST00000635020 330 ntBASIC1.74□□□□□ -2.13
CASC4Q6P4E1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CASC4Q6P4E1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CASC4Q6P4E1 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNU6-596P-201ENST00000365395 98 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNU6-439P-201ENST00000384188 106 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 MIR586-201ENST00000385035 97 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 MIR153-2-201ENST00000385225 87 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 MIR320B2-201ENST00000408479 138 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RPL21P111-201ENST00000418453 477 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RPL30P16-201ENST00000419341 429 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.73□□□□□ -2.13
CASC4Q6P4E1 USP9YP30-201ENST00000430729 455 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNU6-498P-201ENST00000459468 107 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AC114982.1-201ENST00000469402 321 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNA5SP384-201ENST00000516615 116 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.73□□□□□ -2.13
CASC4Q6P4E1 MIR4790-201ENST00000577799 79 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 MIR4742-201ENST00000581069 85 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AC084782.3-201ENST00000612282 578 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AC008873.1-201ENST00000625051 138 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 AL133216.2-202ENST00000634512 349 ntBASIC1.73□□□□□ -2.13
CASC4Q6P4E1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CASC4Q6P4E1 RNU4-42P-201ENST00000364738 142 ntBASIC1.72□□□□□ -2.13
CASC4Q6P4E1 RNU6-842P-201ENST00000384269 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms