Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RNY3P9-201ENST00000384727 106 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 MIR499A-201ENST00000384903 122 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 MIR487A-201ENST00000385009 80 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 Y_RNA.582-201ENST00000391023 95 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 MTCO1P21-201ENST00000416634 589 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 MTCO3P29-201ENST00000432119 779 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC004386.2-201ENST00000441858 148 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 RPS29P27-201ENST00000463711 170 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AL163195.1-201ENST00000496941 348 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC092436.3-201ENST00000511788 257 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 SNORA19.2-201ENST00000516013 114 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC092807.2-201ENST00000609367 243 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC126177.8-201ENST00000618339 1015 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 AC103705.1-201ENST00000619013 241 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNU6-325P-201ENST00000411132 105 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC060773.1-201ENST00000421698 310 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC069257.2-201ENST00000441819 155 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 MTND3P16-201ENST00000452205 344 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNU6-261P-201ENST00000459506 102 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 U8.21-201ENST00000459536 136 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC083904.1-201ENST00000487828 231 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1069P-201ENST00000516612 133 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNA5SP384-201ENST00000516615 116 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC104383.1-201ENST00000530297 370 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 MIR4753-201ENST00000585119 83 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AP000907.4-201ENST00000604143 237 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC104458.1-201ENST00000608243 463 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC005520.5-201ENST00000613926 164 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
H3F3CQ6NXT2 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 SNORA25.9-201ENST00000365087 128 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 RNU6-968P-201ENST00000384076 107 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 MIR1287-201ENST00000408492 90 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 MTCO3P8-201ENST00000453691 755 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 snoU13.27-201ENST00000459278 104 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 HMGN2P9-201ENST00000476875 229 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AC091133.4-201ENST00000511142 308 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 Y_RNA.688-201ENST00000516565 95 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AL157687.1-201ENST00000554853 619 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 CYP3A52P-201ENST00000563326 91 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AC146944.4-201ENST00000602697 718 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 RPL17P51-201ENST00000605218 238 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 CTHRC1P1-201ENST00000605383 469 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AC005562.2-201ENST00000618264 111 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 AL136221.1-201ENST00000621449 509 ntBASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.1□□□□□ -2.23
H3F3CQ6NXT2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1252P-201ENST00000363054 104 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1119P-201ENST00000384349 108 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 MIR1283-1-201ENST00000408494 87 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1068P-201ENST00000410958 103 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 SNX2P2-201ENST00000424553 323 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 CST2P1-201ENST00000425770 87 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 USP9YP14-201ENST00000430663 563 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AC011406.1-201ENST00000512440 370 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 Y_RNA.704-201ENST00000516851 102 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AP003465.2-201ENST00000602571 373 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 AC006001.4-201ENST00000622243 395 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 OR5AK4P-201ENST00000635912 903 ntBASIC1.09□□□□□ -2.23
H3F3CQ6NXT2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
H3F3CQ6NXT2 MTND5P26-201ENST00000426018 1752 ntBASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 RNU6-562P-201ENST00000362731 107 ntBASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 RNU6-1085P-201ENST00000363576 107 ntBASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 SNORA33-201ENST00000363664 130 ntBASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 RNU6-1305P-201ENST00000364353 104 ntBASIC1.08□□□□□ -2.24
H3F3CQ6NXT2 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms