Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC023158.1-201ENST00000561632 1025 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC133485.4-201ENST00000561835 220 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 MIR3136-201ENST00000583498 78 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 U7.6-201ENST00000610841 64 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 SNORA2.2-201ENST00000365473 135 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 MIR802-201ENST00000390235 94 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 SNORD100-201ENST00000408573 76 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 ELOCP21-201ENST00000412558 336 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AL512637.2-201ENST00000431287 1256 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC106754.1-201ENST00000562632 1513 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC084368.1-201ENST00000620935 65 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC098679.4-201ENST00000624241 654 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-862P-201ENST00000362804 105 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC083799.1-201ENST00000366451 910 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC069271.1-201ENST00000445577 156 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC090049.2-201ENST00000550377 109 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 MIR3152-201ENST00000579801 74 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC078795.3-201ENST00000602913 472 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC022022.2-201ENST00000602989 360 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AP002802.2-201ENST00000605877 235 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AL603758.1-201ENST00000618654 241 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC093726.3-201ENST00000637588 150 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-534P-201ENST00000364877 106 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-444P-201ENST00000383988 108 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-390P-201ENST00000516259 103 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 MIR2115-201ENST00000516657 100 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNA5SP290-201ENST00000517133 127 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 OR8K2P-201ENST00000524645 927 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 POLR3GP2-201ENST00000588366 668 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC068790.2-201ENST00000602601 557 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 HMGB1P51-201ENST00000605166 638 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC131159.1-201ENST00000621854 213 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 snoZ40.1-201ENST00000364540 72 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC112206.4-201ENST00000515142 405 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU4-49P-201ENST00000516080 140 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-123P-201ENST00000516163 102 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC140658.3-201ENST00000567603 271 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 AC006600.1-201ENST00000572529 153 ntBASIC-0.6□□□□□ -2.51
VPS13DQ5THJ4 RNU6-199P-201ENST00000362954 107 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 SNORA26.3-201ENST00000391119 136 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 FCF1P9-201ENST00000412546 282 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RPP40P1-201ENST00000426762 456 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 MTATP6P30-201ENST00000443540 664 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC093303.1-201ENST00000514549 295 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-448P-201ENST00000517052 107 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC006380.1-201ENST00000603598 186 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 MTND1P14-201ENST00000427400 950 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AL162725.1-201ENST00000435405 301 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-977P-201ENST00000516411 103 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC109446.1-201ENST00000566172 220 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AL158211.4-201ENST00000606988 584 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 SNORD114-19-201ENST00000363072 75 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 SNORA32.2-201ENST00000384049 122 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 MLLT10P1-201ENST00000418346 262 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC068135.1-201ENST00000446164 246 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 MIR4677-201ENST00000584153 80 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 uc_338.19-201ENST00000616808 99 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC068792.1-201ENST00000621354 417 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 MIR1298-201ENST00000408783 112 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-447P-201ENST00000410293 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-355P-201ENST00000410427 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-791P-201ENST00000410467 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-705P-201ENST00000410601 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-860P-201ENST00000410860 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 RNU6-785P-201ENST00000411324 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 HSFY5P-201ENST00000453726 309 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC010424.1-201ENST00000506336 297 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 SNRPGP1-201ENST00000553864 222 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 U6.90-201ENST00000614007 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 U6.70-201ENST00000620287 104 ntBASIC-0.61□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 RNU6-370P-201ENST00000411008 104 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AC133104.1-201ENST00000429100 218 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms