Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 HMGB1P35-201ENST00000503360 598 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.94□□□□□ -1.94
LONRF3Q496Y0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.94□□□□□ -1.94
LONRF3Q496Y0 RNA5SP282-201ENST00000516355 108 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AC027288.2-201ENST00000553028 243 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AL442163.3-201ENST00000554110 156 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 RPS29P30-201ENST00000600975 111 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AL355297.3-201ENST00000604082 446 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AL034555.1-201ENST00000604816 211 ntBASIC2.94□□□□□ -1.94
LONRF3Q496Y0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LONRF3Q496Y0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LONRF3Q496Y0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 SNORA25B-201ENST00000365507 128 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 RNU6-541P-201ENST00000384709 110 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 MIR95-201ENST00000385072 81 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 RNA5SP148-201ENST00000516527 94 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 RNU6-965P-201ENST00000516721 96 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 RNU6-567P-201ENST00000516746 107 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 MIR2355-201ENST00000517199 87 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 AC131281.1-201ENST00000522984 164 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 CYCSP26-201ENST00000534107 320 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 AL021879.1-201ENST00000611756 288 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
LONRF3Q496Y0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LONRF3Q496Y0 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU4-50P-201ENST00000364361 141 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU6-26P-201ENST00000383985 107 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU6-546P-201ENST00000383991 107 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 SNORA6-201ENST00000384033 151 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 MIR568-201ENST00000385036 95 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU1-139P-201ENST00000391307 165 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 Y_RNA.597-201ENST00000410463 100 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RPS26P42-201ENST00000413485 326 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RPS3P1-201ENST00000456781 192 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 MRPS35P2-201ENST00000508242 191 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU6-635P-201ENST00000516651 102 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU7-193P-201ENST00000516723 65 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 RNU6-58P-201ENST00000517143 103 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AC022868.1-201ENST00000517767 391 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 CYP4A27P-201ENST00000567218 190 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AC078899.2-201ENST00000595282 212 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 AL390123.1-201ENST00000603216 237 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 MIR6895-201ENST00000613497 78 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 MIR6817-201ENST00000615588 66 ntBASIC2.92□□□□□ -1.94
LONRF3Q496Y0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
LONRF3Q496Y0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 RNU6-944P-201ENST00000364023 107 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 SNORA25.6-201ENST00000364121 118 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 RNU6-743P-201ENST00000364151 106 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 SNORA63.7-201ENST00000365579 123 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 MIR9-1-201ENST00000385198 89 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LONRF3Q496Y0 RNA5SP213-201ENST00000391031 106 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 MTCYBP9-201ENST00000431021 303 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 SRIP1-201ENST00000489235 288 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 MTCO2P24-201ENST00000515611 426 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 AP002770.2-201ENST00000543613 532 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.91□□□□□ -1.94
LONRF3Q496Y0 UBL5P4-201ENST00000562584 236 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 PRR13P7-201ENST00000605538 430 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 AC069528.2-201ENST00000624849 1991 ntBASIC2.91□□□□□ -1.94
LONRF3Q496Y0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.9□□□□□ -1.94
LONRF3Q496Y0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.149-201ENST00000363558 117 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 RNU6-137P-201ENST00000363680 108 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 SNORD115-8-201ENST00000363856 82 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 SNORD115-38-201ENST00000365037 82 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 RNU6-463P-201ENST00000384340 107 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 RNY3P4-201ENST00000384428 101 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 EIF1P2-201ENST00000428233 350 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 WARS2P1-201ENST00000429678 537 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC145146.1-201ENST00000496370 254 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC010469.2-201ENST00000496412 480 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 RNU6-667P-201ENST00000517186 102 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 MIR3923-201ENST00000579521 83 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AL356575.1-201ENST00000603008 283 ntBASIC2.9□□□□□ -1.95
LONRF3Q496Y0 AP000942.4-201ENST00000604811 241 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 266.6 ms