Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 Y_RNA.480-201ENST00000384364 102 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 RNU6-434P-201ENST00000384376 107 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 SNORD41-201ENST00000386967 70 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 Y_RNA.598-201ENST00000410480 95 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 CETN4P-201ENST00000432407 469 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 GPR143P-201ENST00000434155 205 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.51□□□□□ -2.33
AP1S1P61966 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.51□□□□□ -2.33
AP1S1P61966 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.51□□□□□ -2.33
AP1S1P61966 HMGB1P29-201ENST00000505659 499 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S1P61966 SNORA31.4-201ENST00000516049 129 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 RNU2-34P-201ENST00000516534 121 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S1P61966 MTND1P8-201ENST00000571424 950 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 MIR4703-201ENST00000577728 79 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 RSL24D1P11-201ENST00000591045 491 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
AP1S1P61966 MIR8054-201ENST00000620877 86 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 AL136221.1-201ENST00000621449 509 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S1P61966 AP000720.1-201ENST00000625091 483 ntBASIC0.51□□□□□ -2.33
AP1S1P61966 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
AP1S1P61966 SNORD73A-201ENST00000386062 65 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RNU6-57P-201ENST00000411348 103 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RPS3AP3-201ENST00000411933 242 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RPS3AP1-201ENST00000413190 320 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S1P61966 AC009961.2-201ENST00000435771 251 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S1P61966 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S1P61966 NFU1P2-201ENST00000448700 469 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.5□□□□□ -2.33
AP1S1P61966 AC105758.1-201ENST00000506038 399 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 AC025465.4-201ENST00000513422 638 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RNU6-947P-201ENST00000516264 106 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 Y_RNA.673-201ENST00000516306 88 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RNU6-405P-201ENST00000516637 110 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 MRPS36P3-201ENST00000519284 130 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 MTCO3P23-201ENST00000561363 289 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 RNU6-85P-201ENST00000605989 107 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
AP1S1P61966 SEPT14P19-203ENST00000633205 211 ntBASIC0.5□□□□□ -2.33
AP1S1P61966 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.49□□□□□ -2.33
AP1S1P61966 RNU6-1305P-201ENST00000364353 104 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 Y_RNA.269-201ENST00000364685 89 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 Y_RNA.355-201ENST00000365462 98 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 Y_RNA.508-201ENST00000384502 114 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 RNU6-440P-201ENST00000390882 105 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 RNA5SP323-201ENST00000391094 133 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 RNU4-46P-201ENST00000410818 138 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AC106883.1-201ENST00000418805 562 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S1P61966 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S1P61966 RPL31P35-201ENST00000431058 377 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S1P61966 snoU13.18-201ENST00000459483 104 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 RPS29P27-201ENST00000463711 170 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S1P61966 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.49□□□□□ -2.33
AP1S1P61966 MIR4778-201ENST00000577635 80 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 MIR5583-1-201ENST00000580941 59 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AL513534.2-201ENST00000603836 250 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AL391834.2-201ENST00000609982 546 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 TCL6_2.1-201ENST00000615162 119 ntBASIC0.49□□□□□ -2.33
AP1S1P61966 AC106754.1-201ENST00000562632 1513 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNU6-1214P-201ENST00000363650 109 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 SNORA67.2-201ENST00000384300 149 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 MTND3P17-201ENST00000416968 344 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.48□□□□□ -2.33
AP1S1P61966 MTCO3P18-201ENST00000440206 761 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.48□□□□□ -2.33
AP1S1P61966 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.48□□□□□ -2.33
AP1S1P61966 AC079781.2-201ENST00000446424 169 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNU7-57P-201ENST00000459540 60 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 BET1P1-201ENST00000482276 359 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNU6-311P-201ENST00000516224 102 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNU7-128P-201ENST00000517247 62 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 AC024995.1-201ENST00000523014 93 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 AP003461.1-201ENST00000528866 78 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 MRPS36P4-201ENST00000534436 298 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.48□□□□□ -2.33
AP1S1P61966 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 GHRLOS.1-201ENST00000610995 70 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 SNORD3E-202ENST00000627253 216 ntBASIC0.48□□□□□ -2.33
AP1S1P61966 RNU5B-2P-201ENST00000363036 113 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 RNU4-12P-201ENST00000365233 139 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 RNU6-282P-201ENST00000365357 103 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 MIR487A-201ENST00000385009 80 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 SNORD12-201ENST00000391002 90 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 RNU1-139P-201ENST00000391307 165 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 MIR942-201ENST00000401111 86 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 MIR1253-201ENST00000408273 105 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.47□□□□□ -2.33
AP1S1P61966 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AL354692.1-201ENST00000423044 315 ntBASIC0.47□□□□□ -2.33
AP1S1P61966 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms