Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDL3P58872 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDL3P58872 RNU1-62P-201ENST00000362599 164 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 SNORD114-6-201ENST00000364393 72 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 Y_RNA.339-201ENST00000365325 102 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 SNORA12.2-201ENST00000391040 156 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 RNA5SP501-201ENST00000410990 112 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 Z82188.1-201ENST00000436709 154 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDL3P58872 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.52□□□□□ -2.01
RHBDL3P58872 AC026782.1-201ENST00000512952 449 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.52□□□□□ -2.01
RHBDL3P58872 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.52□□□□□ -2.01
RHBDL3P58872 AL096840.1-201ENST00000603287 93 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 SNORD11B-201ENST00000607707 90 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
RHBDL3P58872 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
RHBDL3P58872 AL159152.1-201ENST00000635019 2587 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 RNU6-1059P-201ENST00000363752 98 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 RNU6-842P-201ENST00000384269 107 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 RNU6-1235P-201ENST00000384559 107 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 AL356432.1-201ENST00000405809 419 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 Y_RNA.594-201ENST00000410373 140 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 AL139156.1-201ENST00000412785 841 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RHBDL3P58872 AC098614.3-201ENST00000438957 440 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDL3P58872 RNU6-498P-201ENST00000459468 107 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 AC010531.2-201ENST00000465012 153 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 AC116353.2-201ENST00000505332 712 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDL3P58872 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.51□□□□□ -2.01
RHBDL3P58872 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.51□□□□□ -2.01
RHBDL3P58872 MIR5002-201ENST00000584713 97 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 DUXAP9-208ENST00000622815 614 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 AL078596.1-201ENST00000624856 447 ntBASIC2.51□□□□□ -2.01
RHBDL3P58872 MTND4P12-201ENST00000498999 1377 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 Y_RNA.2-201ENST00000362330 96 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 RNU6-700P-201ENST00000391043 107 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 RNA5SP181-201ENST00000410246 98 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDL3P58872 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.5□□□□□ -2.01
RHBDL3P58872 RBMX2P4-201ENST00000441256 376 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 MTND3P10-201ENST00000450967 341 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 Y_RNA.635-201ENST00000459041 101 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 RNA5SP57-201ENST00000459463 123 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 SNORA25.14-201ENST00000516481 132 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 Y_RNA.691-201ENST00000516611 103 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 RNU6-856P-201ENST00000516959 98 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 AC027288.2-201ENST00000553028 243 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 MIR4299-201ENST00000577899 72 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 RBM11P1-201ENST00000604951 799 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.5□□□□□ -2.01
RHBDL3P58872 AC083806.3-201ENST00000614016 455 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 AC008873.1-201ENST00000625051 138 ntBASIC2.5□□□□□ -2.01
RHBDL3P58872 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RHBDL3P58872 AL356292.1-201ENST00000283110 373 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 MIR340-201ENST00000362125 95 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 RNU6-1305P-201ENST00000364353 104 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 RNU6-975P-201ENST00000384296 105 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 U8.13-201ENST00000390842 128 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 RNU6-159P-201ENST00000391080 106 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 ATP5J2P3-201ENST00000451550 258 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 Y_RNA.638-201ENST00000459374 113 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDL3P58872 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDL3P58872 AL121579.1-201ENST00000555129 305 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 ZNF355P-201ENST00000427301 3216 ntBASIC2.49□□□□□ -2.01
RHBDL3P58872 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDL3P58872 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDL3P58872 Y_RNA.405-201ENST00000383979 100 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 Y_RNA.451-201ENST00000384200 100 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 Y_RNA.524-201ENST00000384564 100 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 Y_RNA.561-201ENST00000384694 100 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 HMGN2P9-201ENST00000476875 229 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 AC090255.1-201ENST00000495779 349 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 AC103851.1-201ENST00000506833 274 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 SNORA20.3-201ENST00000516880 132 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
RHBDL3P58872 TPTEP1-208ENST00000636884 213 ntBASIC2.48□□□□□ -2.01
RHBDL3P58872 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RHBDL3P58872 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RHBDL3P58872 AL359851.1-201ENST00000569460 4997 ntBASIC2.47□□□□□ -2.01
RHBDL3P58872 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RHBDL3P58872 Y_RNA.88-201ENST00000363029 99 ntBASIC2.47□□□□□ -2.01
RHBDL3P58872 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
RHBDL3P58872 AC112492.4-201ENST00000456549 352 ntBASIC2.47□□□□□ -2.01
RHBDL3P58872 AC108210.2-201ENST00000503681 201 ntBASIC2.47□□□□□ -2.01
RHBDL3P58872 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
RHBDL3P58872 CBX3P8-201ENST00000532412 525 ntBASIC2.47□□□□□ -2.01
RHBDL3P58872 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RHBDL3P58872 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
RHBDL3P58872 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RHBDL3P58872 Y_RNA.184-201ENST00000363884 108 ntBASIC2.46□□□□□ -2.02
RHBDL3P58872 MIR549A-201ENST00000385268 96 ntBASIC2.46□□□□□ -2.02
RHBDL3P58872 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms