Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNU6-873P-201ENST00000363833 107 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 RPL19P1-201ENST00000411635 428 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 DPH3P2-201ENST00000422618 250 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN2P57739 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 AC005534.2-201ENST00000431047 433 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 MTCO3P8-201ENST00000453691 755 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN2P57739 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN2P57739 MIR449C-201ENST00000516047 92 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 RNU6-344P-201ENST00000516635 111 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 RNU6-1098P-201ENST00000516772 96 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN2P57739 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN2P57739 UBL5P4-201ENST00000562584 236 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN2P57739 MIR5695-201ENST00000579717 85 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 AC092447.9-201ENST00000603395 144 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 SNRPGP17-201ENST00000603780 214 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN2P57739 AC005296.1-201ENST00000616145 209 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
CLDN2P57739 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CLDN2P57739 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN2P57739 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN2P57739 SNORA25.6-201ENST00000364121 118 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 RNU6-281P-201ENST00000384212 103 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 RNY1P14-201ENST00000384426 108 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLDN2P57739 MTCYBP6-201ENST00000441810 138 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 RN7SKP295-201ENST00000517264 153 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN2P57739 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 VN1R91P-201ENST00000594377 169 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 U2.1-201ENST00000618978 145 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 AC138305.3-201ENST00000624988 240 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 MIR1248-201ENST00000629190 106 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 MIR4272-201ENST00000635924 64 ntBASIC2.28□□□□□ -2.04
CLDN2P57739 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN2P57739 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLDN2P57739 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN2P57739 Y_RNA.28-201ENST00000362554 111 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 RNU6-793P-201ENST00000384233 104 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 RNU6-1011P-201ENST00000384668 107 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MIR628-201ENST00000385229 95 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MIR549A-201ENST00000385268 96 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MIR300-201ENST00000401138 83 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MTCO3P19-201ENST00000415864 321 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MCFD2P1-201ENST00000417812 300 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 PMCHL1-202ENST00000423102 261 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 RNU6-475P-201ENST00000516073 104 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 Y_RNA.711-201ENST00000516993 102 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 RNU6-988P-201ENST00000519081 107 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 CYCSP23-201ENST00000519781 313 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 CYCSP26-201ENST00000534107 320 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 GNAI2P1-201ENST00000541815 315 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AC004486.1-201ENST00000546846 233 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AL442663.2-201ENST00000554385 511 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AC006157.1-201ENST00000611750 366 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AC010999.1-201ENST00000611856 324 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AC083806.3-201ENST00000614016 455 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 AL606534.2-204ENST00000635008 178 ntBASIC2.27□□□□□ -2.05
CLDN2P57739 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
CLDN2P57739 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CLDN2P57739 Y_RNA.31-201ENST00000362574 102 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 Y_RNA.179-201ENST00000363844 90 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 SNORD31B-201ENST00000364977 69 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU6-1026P-201ENST00000384465 108 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN2P57739 SRIP3-201ENST00000413200 219 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN2P57739 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN2P57739 MTND4P19-201ENST00000446659 478 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU7-14P-201ENST00000459331 62 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 snoU13.15-201ENST00000459407 104 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU7-169P-201ENST00000459456 61 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN2P57739 SNORA25.10-201ENST00000515926 124 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU4-77P-201ENST00000516692 156 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNU6-826P-201ENST00000516827 104 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RNA5SP490-201ENST00000517141 136 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AC022868.1-201ENST00000517767 391 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN2P57739 AC093023.1-201ENST00000547375 507 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AL442163.3-201ENST00000554110 156 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 ANP32BP3-201ENST00000559213 706 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 AC020661.2-201ENST00000560114 134 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 MIR3670-2-201ENST00000582974 65 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 MIR3670-1-201ENST00000584160 65 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 MIR3171-201ENST00000584270 74 ntBASIC2.26□□□□□ -2.05
CLDN2P57739 MIR3670-3-201ENST00000584855 65 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms