Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC007098.1-201ENST00000420122 367 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.8□□□□□ -2.12
RIPK4P57078 RPL9P9-202ENST00000466501 579 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 MTCO1P29-201ENST00000496868 288 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RIPK4P57078 AC091874.1-201ENST00000511402 339 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 RNU6-120P-201ENST00000516077 103 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.8□□□□□ -2.12
RIPK4P57078 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.8□□□□□ -2.12
RIPK4P57078 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.8□□□□□ -2.12
RIPK4P57078 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 AL050343.2-201ENST00000607338 280 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 AC084781.2-201ENST00000615568 161 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 MTND4P29-201ENST00000503122 1372 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.79□□□□□ -2.12
RIPK4P57078 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 Y_RNA.535-201ENST00000384612 99 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 RNU6-1222P-201ENST00000384615 107 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 MIR517A-201ENST00000385001 87 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 MIR29B2-201ENST00000385055 81 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 SNORA40.19-201ENST00000390846 128 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AF228730.4-201ENST00000421457 183 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AL591043.1-201ENST00000432461 424 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.79□□□□□ -2.12
RIPK4P57078 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC107399.1-201ENST00000451226 265 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC009474.2-201ENST00000451383 136 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AL353752.1-201ENST00000454946 260 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 MTCO3P10-201ENST00000455912 772 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.79□□□□□ -2.12
RIPK4P57078 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.79□□□□□ -2.12
RIPK4P57078 AC107032.1-201ENST00000485945 480 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AK3P2-201ENST00000507976 429 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 SNORA4.4-201ENST00000515921 135 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 RNU6-1153P-201ENST00000516760 105 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 Y_RNA.718-201ENST00000517110 102 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC109479.2-201ENST00000517842 174 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.79□□□□□ -2.12
RIPK4P57078 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 VN1R107P-201ENST00000601784 209 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 SNRPGP17-201ENST00000603780 214 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AL133215.3-201ENST00000609801 448 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC022202.1-201ENST00000613515 211 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 MIR7974-201ENST00000615835 79 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
RIPK4P57078 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.79□□□□□ -2.12
RIPK4P57078 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RIPK4P57078 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RIPK4P57078 Y_RNA.48-201ENST00000362710 103 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-1188P-201ENST00000363795 107 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 Y_RNA.387-201ENST00000383918 102 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-611P-201ENST00000384276 104 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-331P-201ENST00000384724 107 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 MT-TD-201ENST00000387419 68 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RIPK4P57078 Y_RNA.594-201ENST00000410373 140 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-370P-201ENST00000411008 104 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.78□□□□□ -2.12
RIPK4P57078 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.78□□□□□ -2.12
RIPK4P57078 RPL39P29-201ENST00000447779 157 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 SNORD5.1-201ENST00000458800 75 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-1037P-201ENST00000459571 107 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RPL7P42-201ENST00000481005 679 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-559P-201ENST00000516151 98 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 RNA5SP384-201ENST00000516615 116 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.78□□□□□ -2.12
RIPK4P57078 AC026271.5-201ENST00000577873 130 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 AC018462.2-201ENST00000605375 395 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 AP000654.2-201ENST00000605633 586 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 AL133255.1-201ENST00000606374 441 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 AC019193.3-201ENST00000609144 554 ntBASIC1.78□□□□□ -2.12
RIPK4P57078 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
RIPK4P57078 RNU6-212P-201ENST00000362642 104 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-527P-201ENST00000363425 104 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-1285P-201ENST00000363480 105 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 Y_RNA.482-201ENST00000384377 111 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-601P-201ENST00000384540 107 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-310P-201ENST00000384655 107 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-1050P-201ENST00000410388 107 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 Y_RNA.646-201ENST00000410980 101 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 MTND3P9-201ENST00000429526 346 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 PCMTD1P1-201ENST00000455560 355 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 SNORD19B-201ENST00000459623 84 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RPL30P12-201ENST00000474666 353 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.77□□□□□ -2.13
RIPK4P57078 AC005741.1-201ENST00000511094 432 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 Y_RNA.676-201ENST00000516393 96 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 RNU6-667P-201ENST00000517186 102 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 AC022616.8-201ENST00000533569 253 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 BNIP3P16-201ENST00000589779 534 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 AL031274.2-201ENST00000599419 203 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 AC124303.1-201ENST00000605703 360 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 AC009229.3-201ENST00000608056 282 ntBASIC1.77□□□□□ -2.13
RIPK4P57078 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RIPK4P57078 RNA5SP276-201ENST00000362580 94 ntBASIC1.76□□□□□ -2.13
RIPK4P57078 SNORD50.1-201ENST00000362987 71 ntBASIC1.76□□□□□ -2.13
RIPK4P57078 Y_RNA.259-201ENST00000364619 101 ntBASIC1.76□□□□□ -2.13
RIPK4P57078 SNORD32A-201ENST00000364805 84 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms