Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNA5SP255-201ENST00000516370 107 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AC025647.1-201ENST00000517879 253 ntBASIC0.45□□□□□ -2.34
RPL28P46779 MRPS36P3-201ENST00000519284 130 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.45□□□□□ -2.34
RPL28P46779 BNIP3P39-201ENST00000601077 554 ntBASIC0.45□□□□□ -2.34
RPL28P46779 RNU6-85P-201ENST00000605989 107 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AC004223.4-201ENST00000612426 332 ntBASIC0.45□□□□□ -2.34
RPL28P46779 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.45□□□□□ -2.34
RPL28P46779 MIR6835-201ENST00000621552 64 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AC106754.2-201ENST00000623006 233 ntBASIC0.45□□□□□ -2.34
RPL28P46779 RNA5SP361-201ENST00000362686 118 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU6-1214P-201ENST00000363650 109 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU4-76P-201ENST00000364509 141 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU4-28P-201ENST00000364739 141 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU6-17P-201ENST00000384245 107 ntBASIC0.44□□□□□ -2.34
RPL28P46779 SNORA67.2-201ENST00000384300 149 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU6-18P-201ENST00000384527 107 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU6-440P-201ENST00000390882 105 ntBASIC0.44□□□□□ -2.34
RPL28P46779 MRPL42P3-201ENST00000401492 326 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AL354692.1-201ENST00000423044 315 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AL593851.1-201ENST00000426171 157 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC245047.3-201ENST00000429428 127 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.44□□□□□ -2.34
RPL28P46779 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.44□□□□□ -2.34
RPL28P46779 SNRPFP3-201ENST00000457792 225 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC007215.1-201ENST00000464893 276 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC010493.1-201ENST00000513479 292 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU6-322P-201ENST00000516010 103 ntBASIC0.44□□□□□ -2.34
RPL28P46779 RNU7-128P-201ENST00000517247 62 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL28P46779 APOOP3-201ENST00000536787 586 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.44□□□□□ -2.34
RPL28P46779 AC133485.1-201ENST00000567176 124 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC138907.6-201ENST00000568401 126 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC004584.2-201ENST00000570407 410 ntBASIC0.44□□□□□ -2.34
RPL28P46779 MIR3973-201ENST00000579824 107 ntBASIC0.44□□□□□ -2.34
RPL28P46779 MIR548AB-201ENST00000584917 84 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC080078.2-201ENST00000603766 501 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AP000907.4-201ENST00000604143 237 ntBASIC0.44□□□□□ -2.34
RPL28P46779 MIR98-201ENST00000606724 119 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC097065.2-201ENST00000608159 533 ntBASIC0.44□□□□□ -2.34
RPL28P46779 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL28P46779 AC073349.3-201ENST00000617616 186 ntBASIC0.44□□□□□ -2.34
RPL28P46779 AC008873.1-201ENST00000625051 138 ntBASIC0.44□□□□□ -2.34
RPL28P46779 snoZ196.1-201ENST00000625269 89 ntBASIC0.44□□□□□ -2.34
RPL28P46779 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.44□□□□□ -2.34
RPL28P46779 OR4G1P-203ENST00000641984 1631 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RNU6-227P-201ENST00000362865 103 ntBASIC0.43□□□□□ -2.34
RPL28P46779 Y_RNA.191-201ENST00000363972 113 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RNU6-1305P-201ENST00000364353 104 ntBASIC0.43□□□□□ -2.34
RPL28P46779 SNORA25.9-201ENST00000365087 128 ntBASIC0.43□□□□□ -2.34
RPL28P46779 MIR942-201ENST00000401111 86 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AL034345.1-201ENST00000407768 123 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RNU6-733P-201ENST00000410759 104 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC008134.1-201ENST00000420943 193 ntBASIC0.43□□□□□ -2.34
RPL28P46779 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.43□□□□□ -2.34
RPL28P46779 RPL31P35-201ENST00000431058 377 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC005002.2-201ENST00000438228 269 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RNU6-221P-201ENST00000459541 99 ntBASIC0.43□□□□□ -2.34
RPL28P46779 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC005178.1-201ENST00000508392 440 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RPL39P5-202ENST00000512505 151 ntBASIC0.43□□□□□ -2.34
RPL28P46779 RNU6-612P-201ENST00000516909 102 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL28P46779 MTND2P32-201ENST00000521584 1038 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.43□□□□□ -2.34
RPL28P46779 FAM106DP-201ENST00000586416 501 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.43□□□□□ -2.34
RPL28P46779 AC068790.6-201ENST00000602558 258 ntBASIC0.43□□□□□ -2.34
RPL28P46779 Z84480.1-201ENST00000605131 311 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC022306.3-201ENST00000619930 550 ntBASIC0.43□□□□□ -2.34
RPL28P46779 AC139792.3-201ENST00000623525 224 ntBASIC0.43□□□□□ -2.34
RPL28P46779 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
RPL28P46779 MTND4P5-201ENST00000435821 1374 ntBASIC0.43□□□□□ -2.34
RPL28P46779 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
RPL28P46779 RNU6-1240P-201ENST00000365155 104 ntBASIC0.42□□□□□ -2.34
RPL28P46779 RNU6-1286P-201ENST00000383871 107 ntBASIC0.42□□□□□ -2.34
RPL28P46779 RNU6-606P-201ENST00000384721 111 ntBASIC0.42□□□□□ -2.34
RPL28P46779 MIR92A1-201ENST00000385233 78 ntBASIC0.42□□□□□ -2.34
RPL28P46779 RNU2-29P-201ENST00000410423 189 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL28P46779 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.42□□□□□ -2.34
RPL28P46779 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL28P46779 AC022364.2-201ENST00000457963 554 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC117454.1-201ENST00000491120 168 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC105417.1-201ENST00000514691 285 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.42□□□□□ -2.34
RPL28P46779 AC090049.2-201ENST00000550377 109 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AL162424.1-201ENST00000602325 221 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC136443.5-201ENST00000603741 370 ntBASIC0.42□□□□□ -2.34
RPL28P46779 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.42□□□□□ -2.34
RPL28P46779 AC092354.1-201ENST00000606057 376 ntBASIC0.42□□□□□ -2.34
RPL28P46779 MIR6504-201ENST00000613520 61 ntBASIC0.42□□□□□ -2.34
RPL28P46779 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
RPL28P46779 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
RPL28P46779 MIR508-201ENST00000384857 115 ntBASIC0.41□□□□□ -2.34
RPL28P46779 RNU6-1106P-201ENST00000390845 107 ntBASIC0.41□□□□□ -2.34
RPL28P46779 RNA5SP494-201ENST00000410653 129 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms