Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-188P-201ENST00000364207 107 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AL663109.1-201ENST00000411498 844 ntBASIC-0.57□□□□□ -2.5
HTTP42858 FCF1P9-201ENST00000412546 282 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AL451054.2-201ENST00000420896 202 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AC092685.1-201ENST00000447960 1243 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU7-129P-201ENST00000516128 62 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
HTTP42858 DEFB130C-202ENST00000530001 230 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AC004217.3-201ENST00000551552 878 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AC018448.1-201ENST00000552843 316 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AC004223.2-201ENST00000590309 544 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AL158211.4-201ENST00000606988 584 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.57□□□□□ -2.5
HTTP42858 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.57□□□□□ -2.5
HTTP42858 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-512P-201ENST00000364438 103 ntBASIC-0.57□□□□□ -2.5
HTTP42858 MIR204-201ENST00000385200 110 ntBASIC-0.57□□□□□ -2.5
HTTP42858 SNORA75.1-201ENST00000391130 148 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-881P-201ENST00000516813 102 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AC022616.3-201ENST00000523940 148 ntBASIC-0.57□□□□□ -2.5
HTTP42858 AP002004.2-201ENST00000531656 154 ntBASIC-0.57□□□□□ -2.5
HTTP42858 MRPS36P5-201ENST00000551909 298 ntBASIC-0.57□□□□□ -2.5
HTTP42858 MIR8054-201ENST00000620877 86 ntBASIC-0.57□□□□□ -2.5
HTTP42858 MTND5P33-201ENST00000571250 1450 ntBASIC-0.57□□□□□ -2.5
HTTP42858 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
HTTP42858 SNORA40C-201ENST00000391285 128 ntBASIC-0.58□□□□□ -2.5
HTTP42858 C1DP2-201ENST00000418167 426 ntBASIC-0.58□□□□□ -2.5
HTTP42858 MTCO2P23-201ENST00000425216 680 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.58□□□□□ -2.5
HTTP42858 AC069271.1-201ENST00000445577 156 ntBASIC-0.58□□□□□ -2.5
HTTP42858 C1DP4-201ENST00000455429 424 ntBASIC-0.58□□□□□ -2.5
HTTP42858 HSPE1P23-201ENST00000509838 286 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RNU6-448P-201ENST00000517052 107 ntBASIC-0.58□□□□□ -2.5
HTTP42858 MTND2P7-201ENST00000521337 640 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.58□□□□□ -2.5
HTTP42858 AC023827.1-201ENST00000569247 97 ntBASIC-0.58□□□□□ -2.5
HTTP42858 MIR3192-201ENST00000584920 77 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.58□□□□□ -2.5
HTTP42858 AL020997.3-201ENST00000602843 359 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AL390123.1-201ENST00000603216 237 ntBASIC-0.58□□□□□ -2.5
HTTP42858 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.58□□□□□ -2.5
HTTP42858 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.58□□□□□ -2.5
HTTP42858 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AL354692.1-201ENST00000423044 315 ntBASIC-0.58□□□□□ -2.5
HTTP42858 MTCO3P27-201ENST00000514397 196 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RBM11P1-201ENST00000604951 799 ntBASIC-0.58□□□□□ -2.5
HTTP42858 SNORD38B-202ENST00000625943 69 ntBASIC-0.58□□□□□ -2.5
HTTP42858 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RNU6-811P-201ENST00000384069 107 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RNU2-3P-201ENST00000410144 191 ntBASIC-0.58□□□□□ -2.5
HTTP42858 CDK8P2-201ENST00000415020 547 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC016831.2-201ENST00000417179 352 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.58□□□□□ -2.5
HTTP42858 HSFY5P-201ENST00000453726 309 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RNU6-475P-201ENST00000516073 104 ntBASIC-0.58□□□□□ -2.5
HTTP42858 RNU6-504P-201ENST00000516568 104 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC024995.1-201ENST00000523014 93 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC040926.1-201ENST00000530195 238 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC104383.1-201ENST00000530297 370 ntBASIC-0.58□□□□□ -2.5
HTTP42858 AC019226.1-201ENST00000625666 515 ntBASIC-0.58□□□□□ -2.5
HTTP42858 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
HTTP42858 AP000568.1-201ENST00000282964 442 ntBASIC-0.59□□□□□ -2.5
HTTP42858 MIR148A-201ENST00000362215 68 ntBASIC-0.59□□□□□ -2.5
HTTP42858 SNORA25.7-201ENST00000364375 127 ntBASIC-0.59□□□□□ -2.5
HTTP42858 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.59□□□□□ -2.5
HTTP42858 RNA5SP163-201ENST00000410304 99 ntBASIC-0.59□□□□□ -2.5
HTTP42858 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.59□□□□□ -2.5
HTTP42858 MIR3925-201ENST00000584674 77 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AL390208.1-201ENST00000605885 644 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC013476.2-201ENST00000614456 459 ntBASIC-0.59□□□□□ -2.5
HTTP42858 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.59□□□□□ -2.5
HTTP42858 RNU6-650P-201ENST00000365658 111 ntBASIC-0.59□□□□□ -2.5
HTTP42858 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC015818.7-201ENST00000428754 109 ntBASIC-0.59□□□□□ -2.5
HTTP42858 MRPS10P2-201ENST00000431226 381 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC087499.7-201ENST00000441958 109 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC007000.2-201ENST00000442564 487 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AL050341.1-201ENST00000447743 313 ntBASIC-0.59□□□□□ -2.5
HTTP42858 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC090572.1-201ENST00000519251 160 ntBASIC-0.59□□□□□ -2.5
HTTP42858 MIR4804-201ENST00000581683 73 ntBASIC-0.59□□□□□ -2.5
HTTP42858 AC090186.1-201ENST00000605991 572 ntBASIC-0.59□□□□□ -2.5
HTTP42858 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.59□□□□□ -2.5
HTTP42858 RNU6-116P-201ENST00000384042 109 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AL592310.1-201ENST00000414330 671 ntBASIC-0.6□□□□□ -2.5
HTTP42858 MTCO3P41-201ENST00000414801 328 ntBASIC-0.6□□□□□ -2.5
HTTP42858 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.6□□□□□ -2.5
HTTP42858 AL606517.2-201ENST00000442855 241 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.6□□□□□ -2.5
HTTP42858 SNORA18.7-201ENST00000516910 131 ntBASIC-0.6□□□□□ -2.5
HTTP42858 MTCO3P15-201ENST00000526563 574 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AL117336.2-201ENST00000602435 335 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AC006380.1-201ENST00000603598 186 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AP000484.1-201ENST00000620067 1252 ntBASIC-0.6□□□□□ -2.5
HTTP42858 AC010154.1-201ENST00000425857 269 ntBASIC-0.6□□□□□ -2.51
HTTP42858 AC092170.1-201ENST00000440211 356 ntBASIC-0.6□□□□□ -2.51
HTTP42858 snoU109.2-201ENST00000459316 135 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms