Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC090517.1-201ENST00000569307 266 ntBASIC1.22□□□□□ -2.21
TNFSF9P41273 AC069114.2-201ENST00000604699 304 ntBASIC1.22□□□□□ -2.21
TNFSF9P41273 AC092807.2-201ENST00000609367 243 ntBASIC1.22□□□□□ -2.21
TNFSF9P41273 AL359880.1-201ENST00000621879 266 ntBASIC1.22□□□□□ -2.21
TNFSF9P41273 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TNFSF9P41273 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TNFSF9P41273 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TNFSF9P41273 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.21
TNFSF9P41273 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU4-24P-201ENST00000364565 139 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 SNORD31B-201ENST00000364977 69 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 MIR514A2-201ENST00000385131 88 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 MIR514A3-201ENST00000385132 88 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU6-360P-201ENST00000390944 104 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 MIR208B-201ENST00000401172 77 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU6-908P-201ENST00000410160 94 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU2-16P-201ENST00000410712 136 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU6-1148P-201ENST00000410992 104 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 MTND3P9-201ENST00000429526 346 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFSF9P41273 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.21□□□□□ -2.22
TNFSF9P41273 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.21□□□□□ -2.22
TNFSF9P41273 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.21□□□□□ -2.22
TNFSF9P41273 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
TNFSF9P41273 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 MRPS36P4-201ENST00000534436 298 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 CYP4A27P-201ENST00000567218 190 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 NBR2-204ENST00000587322 63 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AC010525.2-201ENST00000590920 195 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 Z98751.3-201ENST00000604447 521 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AP001836.1-201ENST00000604675 523 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 U2.17-201ENST00000611454 95 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 uc_338.11-201ENST00000619132 160 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
TNFSF9P41273 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
TNFSF9P41273 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TNFSF9P41273 RNU6-1317P-201ENST00000364582 104 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 MIR548B-201ENST00000385247 97 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 SNORD37.1-201ENST00000390968 65 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 MIR450B-201ENST00000401182 78 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 RPL23AP95-201ENST00000426806 265 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 MRPS10P2-201ENST00000431226 381 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFSF9P41273 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFSF9P41273 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.2□□□□□ -2.22
TNFSF9P41273 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.2□□□□□ -2.22
TNFSF9P41273 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFSF9P41273 AC010493.1-201ENST00000513479 292 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 RNU6-189P-201ENST00000516120 101 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 Y_RNA.693-201ENST00000516641 110 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 RNU6-567P-201ENST00000516746 107 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFSF9P41273 AC011604.1-201ENST00000545978 196 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 RNU6-89P-201ENST00000606519 100 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
TNFSF9P41273 RMST_3.1-201ENST00000611651 109 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AC103705.1-201ENST00000619013 241 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 AL121890.5-201ENST00000620848 304 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
TNFSF9P41273 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
TNFSF9P41273 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
TNFSF9P41273 Y_RNA.132-201ENST00000363421 102 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 RNU6-42P-201ENST00000384165 107 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AL590632.1-201ENST00000424289 371 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 FTH1P12-201ENST00000432137 551 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC010531.2-201ENST00000465012 153 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC107401.1-201ENST00000503426 685 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC079140.5-201ENST00000507882 310 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 RNU6-1332P-201ENST00000516666 104 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 SNORD60.2-201ENST00000516883 86 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.19□□□□□ -2.22
TNFSF9P41273 AL512360.1-201ENST00000555346 234 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 MIR3937-201ENST00000580135 106 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AL357078.3-201ENST00000607528 618 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
TNFSF9P41273 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU6-451P-201ENST00000362921 107 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU6-1085P-201ENST00000363576 107 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU1-96P-201ENST00000364163 162 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU4-40P-201ENST00000364351 143 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU6-877P-201ENST00000383868 107 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 SNORA26.3-201ENST00000391119 136 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 AC004866.1-201ENST00000411748 78 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 ARL5AP1-201ENST00000418991 388 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RPS27P16-201ENST00000425758 201 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 AC245047.4-201ENST00000433189 144 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms