Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1□□□□□ -2.25
RFC3P40938 U8.21-201ENST00000459536 136 ntBASIC1□□□□□ -2.25
RFC3P40938 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
RFC3P40938 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
RFC3P40938 AC087854.1-201ENST00000519706 414 ntBASIC1□□□□□ -2.25
RFC3P40938 AC024995.1-201ENST00000523014 93 ntBASIC1□□□□□ -2.25
RFC3P40938 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1□□□□□ -2.25
RFC3P40938 MIR4760-201ENST00000585040 80 ntBASIC1□□□□□ -2.25
RFC3P40938 AC087683.1-201ENST00000591187 441 ntBASIC1□□□□□ -2.25
RFC3P40938 AP000907.4-201ENST00000604143 237 ntBASIC1□□□□□ -2.25
RFC3P40938 MZT1P2-201ENST00000604387 248 ntBASIC1□□□□□ -2.25
RFC3P40938 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1□□□□□ -2.25
RFC3P40938 AC040896.1-201ENST00000613819 479 ntBASIC1□□□□□ -2.25
RFC3P40938 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
RFC3P40938 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.99□□□□□ -2.25
RFC3P40938 RNU6-82P-201ENST00000363970 107 ntBASIC0.99□□□□□ -2.25
RFC3P40938 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
RFC3P40938 MIR586-201ENST00000385035 97 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AL606923.1-201ENST00000406616 190 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.99□□□□□ -2.25
RFC3P40938 CDK8P2-201ENST00000415020 547 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.99□□□□□ -2.25
RFC3P40938 MTND3P9-201ENST00000429526 346 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.99□□□□□ -2.25
RFC3P40938 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC074290.1-201ENST00000448883 135 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC007215.1-201ENST00000464893 276 ntBASIC0.99□□□□□ -2.25
RFC3P40938 HMGN1P12-201ENST00000499125 195 ntBASIC0.99□□□□□ -2.25
RFC3P40938 RNU6-189P-201ENST00000516120 101 ntBASIC0.99□□□□□ -2.25
RFC3P40938 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC064836.2-201ENST00000609491 462 ntBASIC0.99□□□□□ -2.25
RFC3P40938 MIR7111-201ENST00000619751 72 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC023510.2-201ENST00000622162 746 ntBASIC0.99□□□□□ -2.25
RFC3P40938 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
RFC3P40938 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
RFC3P40938 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
RFC3P40938 Y_RNA.169-201ENST00000363745 96 ntBASIC0.98□□□□□ -2.25
RFC3P40938 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
RFC3P40938 MIR549A-201ENST00000385268 96 ntBASIC0.98□□□□□ -2.25
RFC3P40938 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
RFC3P40938 RNU6-1158P-201ENST00000391167 107 ntBASIC0.98□□□□□ -2.25
RFC3P40938 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.98□□□□□ -2.25
RFC3P40938 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
RFC3P40938 MTCO3P8-201ENST00000453691 755 ntBASIC0.98□□□□□ -2.25
RFC3P40938 RNU7-34P-201ENST00000459394 64 ntBASIC0.98□□□□□ -2.25
RFC3P40938 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
RFC3P40938 MTCO3P38-201ENST00000468910 766 ntBASIC0.98□□□□□ -2.25
RFC3P40938 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
RFC3P40938 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.98□□□□□ -2.25
RFC3P40938 RNU6-1069P-201ENST00000516612 133 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.98□□□□□ -2.25
RFC3P40938 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.98□□□□□ -2.25
RFC3P40938 SCOCP1-201ENST00000554676 349 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.98□□□□□ -2.25
RFC3P40938 MIR4528-201ENST00000577763 90 ntBASIC0.98□□□□□ -2.25
RFC3P40938 FGF7P1-201ENST00000582820 288 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AL078603.1-201ENST00000603824 313 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AL391646.1-201ENST00000603860 190 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AL354950.2-201ENST00000617939 290 ntBASIC0.98□□□□□ -2.25
RFC3P40938 AC103705.1-201ENST00000619013 241 ntBASIC0.98□□□□□ -2.25
RFC3P40938 MTND4P5-201ENST00000435821 1374 ntBASIC0.97□□□□□ -2.25
RFC3P40938 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RFC3P40938 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
RFC3P40938 Y_RNA.287-201ENST00000364853 94 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RNU6-1329P-201ENST00000365664 107 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RNU6-348P-201ENST00000384386 107 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RPL21P1-201ENST00000399532 476 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RN7SKP142-201ENST00000411236 328 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC004866.1-201ENST00000411748 78 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AL591704.2-201ENST00000421658 181 ntBASIC0.97□□□□□ -2.25
RFC3P40938 MTCO2P19-201ENST00000427513 598 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC073464.1-201ENST00000429823 534 ntBASIC0.97□□□□□ -2.25
RFC3P40938 NDUFA5P4-201ENST00000436704 385 ntBASIC0.97□□□□□ -2.25
RFC3P40938 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.97□□□□□ -2.25
RFC3P40938 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.97□□□□□ -2.25
RFC3P40938 TPTE2P5-203ENST00000458118 728 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.97□□□□□ -2.25
RFC3P40938 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.97□□□□□ -2.25
RFC3P40938 RN7SKP88-201ENST00000516847 250 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RNA5SP404-201ENST00000517118 132 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.97□□□□□ -2.25
RFC3P40938 AC011604.1-201ENST00000545978 196 ntBASIC0.97□□□□□ -2.25
RFC3P40938 Z99497.2-201ENST00000603634 310 ntBASIC0.97□□□□□ -2.25
RFC3P40938 SNRPGP20-201ENST00000604477 205 ntBASIC0.97□□□□□ -2.25
RFC3P40938 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
RFC3P40938 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
RFC3P40938 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.97□□□□□ -2.25
RFC3P40938 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
RFC3P40938 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
RFC3P40938 AC139792.3-201ENST00000623525 224 ntBASIC0.97□□□□□ -2.25
RFC3P40938 RNU6-1317P-201ENST00000364582 104 ntBASIC0.96□□□□□ -2.26
RFC3P40938 RNA5SP259-201ENST00000365541 109 ntBASIC0.96□□□□□ -2.26
RFC3P40938 RNU6-968P-201ENST00000384076 107 ntBASIC0.96□□□□□ -2.26
RFC3P40938 RNU6-950P-201ENST00000384651 107 ntBASIC0.96□□□□□ -2.26
RFC3P40938 RNU6-417P-201ENST00000384712 107 ntBASIC0.96□□□□□ -2.26
RFC3P40938 MIR518E-201ENST00000385252 88 ntBASIC0.96□□□□□ -2.26
RFC3P40938 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
RFC3P40938 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms