Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.18□□□□□ -1.9
VAMP1P23763 RNA5SP208-201ENST00000516156 78 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 CYCSP29-201ENST00000533731 318 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 MIR4425-201ENST00000580572 84 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 MIR6868-201ENST00000611215 58 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.15-201ENST00000611544 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.16-201ENST00000613119 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.12-201ENST00000613778 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.20-201ENST00000613956 192 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.9-201ENST00000615427 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.11-201ENST00000616345 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.2-201ENST00000616535 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.3-201ENST00000617785 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.19-201ENST00000618602 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 RNU2-1-201ENST00000618664 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.6-201ENST00000619225 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.5-201ENST00000619465 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 U2.10-201ENST00000620268 191 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP1P23763 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP1P23763 AL356292.1-201ENST00000283110 373 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 RNU1-58P-201ENST00000362413 163 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 Y_RNA.269-201ENST00000364685 89 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP1P23763 RPS29P17-201ENST00000430795 166 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 CR769767.1-201ENST00000436337 346 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 RNU1-142P-201ENST00000516682 145 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 AC136628.3-201ENST00000521868 290 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.17□□□□□ -1.9
VAMP1P23763 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 AC018445.2-201ENST00000622987 260 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 AC068647.2-201ENST00000637380 353 ntBASIC3.17□□□□□ -1.9
VAMP1P23763 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP1P23763 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP1P23763 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP1P23763 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP1P23763 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
VAMP1P23763 Y_RNA.368-201ENST00000365547 113 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 MIR515-2-201ENST00000384883 83 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 MIR515-1-201ENST00000384884 83 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 MTCO2P33-201ENST00000402100 465 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.16□□□□□ -1.9
VAMP1P23763 AC006466.1-201ENST00000438721 289 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 AL049873.1-201ENST00000480540 376 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP1P23763 AC091167.4-201ENST00000605079 184 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
VAMP1P23763 AL359075.3-201ENST00000613288 217 ntBASIC3.16□□□□□ -1.9
VAMP1P23763 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.16□□□□□ -1.9
VAMP1P23763 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP1P23763 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VAMP1P23763 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP1P23763 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.15□□□□□ -1.9
VAMP1P23763 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.15□□□□□ -1.9
VAMP1P23763 RNU6-1272P-201ENST00000362776 107 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 RNU6-1164P-201ENST00000364428 107 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 MIR937-201ENST00000401271 86 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.15□□□□□ -1.91
VAMP1P23763 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.15□□□□□ -1.91
VAMP1P23763 AC073264.2-201ENST00000448886 166 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 RNU6-794P-201ENST00000517261 64 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 RNA5SP179-201ENST00000517284 121 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 SNORD14A-201ENST00000606526 91 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.15□□□□□ -1.91
VAMP1P23763 MIR6798-201ENST00000612887 67 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 AC073349.3-201ENST00000617616 186 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.15□□□□□ -1.91
VAMP1P23763 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VAMP1P23763 RNU1-96P-201ENST00000364163 162 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 Y_RNA.361-201ENST00000365515 120 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 Y_RNA.539-201ENST00000384635 107 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 RNU6-136P-201ENST00000384663 107 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 RPS26P8-201ENST00000393490 348 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 BX510359.4-201ENST00000423750 193 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AC006989.1-201ENST00000427212 131 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.14□□□□□ -1.91
VAMP1P23763 AC097462.1-201ENST00000514125 324 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 RNU6-63P-201ENST00000516690 95 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.14□□□□□ -1.91
VAMP1P23763 MIR4436B2-201ENST00000581415 91 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 MIR4436B1-201ENST00000583272 91 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AL161756.2-201ENST00000604597 246 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 AL442067.1-201ENST00000613261 223 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 U6.73-201ENST00000619194 103 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 snoU18.1-201ENST00000629629 71 ntBASIC3.14□□□□□ -1.91
VAMP1P23763 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAMP1P23763 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAMP1P23763 RNU6-899P-201ENST00000363947 107 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 Y_RNA.293-201ENST00000364908 93 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 MIR524-201ENST00000385242 87 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 MIR199A2-201ENST00000385289 110 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 SUMO1P4-201ENST00000429430 302 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 RPS20P10-201ENST00000451209 253 ntBASIC3.13□□□□□ -1.91
VAMP1P23763 Y_RNA.638-201ENST00000459374 113 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms