Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 RRN3P3-201ENST00000549207 578 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 UBE2V2P2-201ENST00000587677 504 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 AC092794.2-201ENST00000620933 563 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TNFAIP3P21580 MTND4P12-201ENST00000498999 1377 ntBASIC2.17□□□□□ -2.06
TNFAIP3P21580 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TNFAIP3P21580 CENPCP1-201ENST00000533085 2578 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TNFAIP3P21580 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TNFAIP3P21580 Y_RNA.184-201ENST00000363884 108 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 MIR676-201ENST00000390702 67 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 MIR548F5-201ENST00000408421 86 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC243428.1-201ENST00000421099 264 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC096638.1-201ENST00000444678 216 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC091951.2-201ENST00000500762 203 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC097473.1-201ENST00000508142 408 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC116337.1-201ENST00000509680 687 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 RNVU1-2-201ENST00000516326 135 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFAIP3P21580 MIR4298-201ENST00000584380 73 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC010928.2-201ENST00000588017 287 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 AC083806.3-201ENST00000614016 455 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
TNFAIP3P21580 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TNFAIP3P21580 ZNF204P-201ENST00000416749 2397 ntBASIC2.15□□□□□ -2.06
TNFAIP3P21580 ZNF299P-201ENST00000406845 1804 ntBASIC2.15□□□□□ -2.06
TNFAIP3P21580 Y_RNA.70-201ENST00000362886 110 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 Y_RNA.319-201ENST00000365138 92 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 SNORA70B-201ENST00000384210 135 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU6-17P-201ENST00000384245 107 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 SNORA51.11-201ENST00000384442 131 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU6-18P-201ENST00000384527 107 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU6-306P-201ENST00000384617 107 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 HMGB1P18-201ENST00000438801 619 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TNFAIP3P21580 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU7-175P-201ENST00000515915 61 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU6-875P-201ENST00000516488 106 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU6-58P-201ENST00000517143 103 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFAIP3P21580 AL353149.1-201ENST00000610667 244 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFAIP3P21580 uc_338.5-201ENST00000611839 155 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFAIP3P21580 AC104260.1-201ENST00000616660 539 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 AC008873.1-201ENST00000625051 138 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.15□□□□□ -2.07
TNFAIP3P21580 TPTEP1-208ENST00000636884 213 ntBASIC2.15□□□□□ -2.07
TNFAIP3P21580 RNU1-62P-201ENST00000362599 164 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 Y_RNA.142-201ENST00000363491 102 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 Y_RNA.166-201ENST00000363730 102 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 RNU6-280P-201ENST00000364145 104 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TNFAIP3P21580 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 AL135786.1-201ENST00000415892 214 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 Y_RNA.804-201ENST00000615262 101 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 MIR6128-201ENST00000615528 109 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 AC022513.1-201ENST00000624512 117 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
TNFAIP3P21580 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
TNFAIP3P21580 RNU6-541P-201ENST00000384709 110 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 DPH3P2-201ENST00000422618 250 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 USMG5P1-201ENST00000425964 177 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 RPS3AP52-201ENST00000435639 297 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 AC107399.1-201ENST00000451226 265 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 MTND4P17-201ENST00000470444 350 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 HMGN2P9-201ENST00000476875 229 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 MTND5P5-201ENST00000503764 376 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 RNU6-1146P-201ENST00000516282 102 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 AL590705.4-201ENST00000532209 134 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 GNAI2P1-201ENST00000541815 315 ntBASIC2.13□□□□□ -2.07
TNFAIP3P21580 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFAIP3P21580 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFAIP3P21580 AC069114.2-201ENST00000604699 304 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms