Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC099513.1-201ENST00000490423 301 ntBASIC1.01□□□□□ -2.25
CD28P10747 AF186996.7-201ENST00000492781 209 ntBASIC1.01□□□□□ -2.25
CD28P10747 AC092436.3-201ENST00000511788 257 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-1038P-201ENST00000516516 104 ntBASIC1.01□□□□□ -2.25
CD28P10747 RNU6-405P-201ENST00000516637 110 ntBASIC1.01□□□□□ -2.25
CD28P10747 AC104576.1-201ENST00000524225 88 ntBASIC1.01□□□□□ -2.25
CD28P10747 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.01□□□□□ -2.25
CD28P10747 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CD28P10747 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.01□□□□□ -2.25
CD28P10747 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.01□□□□□ -2.25
CD28P10747 PRR13P7-201ENST00000605538 430 ntBASIC1.01□□□□□ -2.25
CD28P10747 RN7SKP299-201ENST00000606679 301 ntBASIC1.01□□□□□ -2.25
CD28P10747 AC004492.1-201ENST00000607036 742 ntBASIC1.01□□□□□ -2.25
CD28P10747 AL121757.2-201ENST00000611223 313 ntBASIC1.01□□□□□ -2.25
CD28P10747 MIR8076-201ENST00000611401 83 ntBASIC1.01□□□□□ -2.25
CD28P10747 MIR7974-201ENST00000615835 79 ntBASIC1.01□□□□□ -2.25
CD28P10747 AC073534.2-201ENST00000620377 381 ntBASIC1.01□□□□□ -2.25
CD28P10747 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 FER-210ENST00000628534 558 ntTSL 5 BASIC1.01□□□□□ -2.25
CD28P10747 MIR338-201ENST00000636369 67 ntBASIC1.01□□□□□ -2.25
CD28P10747 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1□□□□□ -2.25
CD28P10747 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CD28P10747 Y_RNA.118-201ENST00000363300 101 ntBASIC1□□□□□ -2.25
CD28P10747 SNORD1A-201ENST00000364968 72 ntBASIC1□□□□□ -2.25
CD28P10747 RNU6-877P-201ENST00000383868 107 ntBASIC1□□□□□ -2.25
CD28P10747 RNU6-418P-201ENST00000384035 107 ntBASIC1□□□□□ -2.25
CD28P10747 SNORA67.2-201ENST00000384300 149 ntBASIC1□□□□□ -2.25
CD28P10747 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
CD28P10747 MIR586-201ENST00000385035 97 ntBASIC1□□□□□ -2.25
CD28P10747 MIR548B-201ENST00000385247 97 ntBASIC1□□□□□ -2.25
CD28P10747 RNA5SP494-201ENST00000410653 129 ntBASIC1□□□□□ -2.25
CD28P10747 MTCO3P29-201ENST00000432119 779 ntBASIC1□□□□□ -2.25
CD28P10747 AC027119.1-201ENST00000440877 241 ntBASIC1□□□□□ -2.25
CD28P10747 AC004386.2-201ENST00000441858 148 ntBASIC1□□□□□ -2.25
CD28P10747 snoU13.30-201ENST00000458951 104 ntBASIC1□□□□□ -2.25
CD28P10747 HMGN1P13-201ENST00000505795 138 ntBASIC1□□□□□ -2.25
CD28P10747 TRAPPC2P7-201ENST00000509650 231 ntBASIC1□□□□□ -2.25
CD28P10747 RNA5SP384-201ENST00000516615 116 ntBASIC1□□□□□ -2.25
CD28P10747 IGHVII-53-1-201ENST00000519538 255 ntBASIC1□□□□□ -2.25
CD28P10747 MRPS36P4-201ENST00000534436 298 ntBASIC1□□□□□ -2.25
CD28P10747 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1□□□□□ -2.25
CD28P10747 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1□□□□□ -2.25
CD28P10747 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1□□□□□ -2.25
CD28P10747 AC008269.2-201ENST00000561915 1105 ntBASIC1□□□□□ -2.25
CD28P10747 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1□□□□□ -2.25
CD28P10747 AC015688.6-201ENST00000577737 104 ntBASIC1□□□□□ -2.25
CD28P10747 AP005136.1-201ENST00000579765 429 ntBASIC1□□□□□ -2.25
CD28P10747 MIR3660-201ENST00000584845 100 ntBASIC1□□□□□ -2.25
CD28P10747 AP003465.2-201ENST00000602571 373 ntBASIC1□□□□□ -2.25
CD28P10747 MIR3976-201ENST00000606807 139 ntBASIC1□□□□□ -2.25
CD28P10747 AL357078.3-201ENST00000607528 618 ntBASIC1□□□□□ -2.25
CD28P10747 MIR7111-201ENST00000619751 72 ntBASIC1□□□□□ -2.25
CD28P10747 AL359880.1-201ENST00000621879 266 ntBASIC1□□□□□ -2.25
CD28P10747 AC008873.1-201ENST00000625051 138 ntBASIC1□□□□□ -2.25
CD28P10747 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
CD28P10747 MTND4P5-201ENST00000435821 1374 ntBASIC0.99□□□□□ -2.25
CD28P10747 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CD28P10747 MTND5P35-201ENST00000557537 1720 ntBASIC0.99□□□□□ -2.25
CD28P10747 Y_RNA.123-201ENST00000363338 102 ntBASIC0.99□□□□□ -2.25
CD28P10747 Y_RNA.231-201ENST00000364358 102 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU6-534P-201ENST00000364877 106 ntBASIC0.99□□□□□ -2.25
CD28P10747 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU6-968P-201ENST00000384076 107 ntBASIC0.99□□□□□ -2.25
CD28P10747 AF228730.1-201ENST00000397972 663 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU2-66P-201ENST00000410650 161 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU6-325P-201ENST00000411132 105 ntBASIC0.99□□□□□ -2.25
CD28P10747 RPL30P13-201ENST00000418873 348 ntBASIC0.99□□□□□ -2.25
CD28P10747 HSPE1P24-201ENST00000450782 238 ntBASIC0.99□□□□□ -2.25
CD28P10747 MTCO1P29-201ENST00000496868 288 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC091435.1-201ENST00000505442 584 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU6-1041P-201ENST00000516254 102 ntBASIC0.99□□□□□ -2.25
CD28P10747 RNU6-948P-201ENST00000516374 107 ntBASIC0.99□□□□□ -2.25
CD28P10747 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.99□□□□□ -2.25
CD28P10747 HMGB1P33-201ENST00000563485 527 ntBASIC0.99□□□□□ -2.25
CD28P10747 MIR4753-201ENST00000585119 83 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC080078.3-201ENST00000605407 463 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC126177.8-201ENST00000618339 1015 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC022079.1-201ENST00000621546 602 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC095038.3-201ENST00000634439 195 ntBASIC0.99□□□□□ -2.25
CD28P10747 OR5AK4P-201ENST00000635912 903 ntBASIC0.99□□□□□ -2.25
CD28P10747 AC068137.3-201ENST00000639191 341 ntBASIC0.99□□□□□ -2.25
CD28P10747 snoU2-30.2-201ENST00000362805 70 ntBASIC0.98□□□□□ -2.25
CD28P10747 Y_RNA.116-201ENST00000363292 103 ntBASIC0.98□□□□□ -2.25
CD28P10747 Y_RNA.122-201ENST00000363331 96 ntBASIC0.98□□□□□ -2.25
CD28P10747 SNORD115-8-201ENST00000363856 82 ntBASIC0.98□□□□□ -2.25
CD28P10747 Y_RNA.191-201ENST00000363972 113 ntBASIC0.98□□□□□ -2.25
CD28P10747 SNORA72.2-201ENST00000365028 127 ntBASIC0.98□□□□□ -2.25
CD28P10747 SNORD115-38-201ENST00000365037 82 ntBASIC0.98□□□□□ -2.25
CD28P10747 Y_RNA.409-201ENST00000383990 98 ntBASIC0.98□□□□□ -2.25
CD28P10747 RNU6-259P-201ENST00000383999 107 ntBASIC0.98□□□□□ -2.25
CD28P10747 RNU6-214P-201ENST00000384130 107 ntBASIC0.98□□□□□ -2.25
CD28P10747 MIR515-2-201ENST00000384883 83 ntBASIC0.98□□□□□ -2.25
CD28P10747 MIR515-1-201ENST00000384884 83 ntBASIC0.98□□□□□ -2.25
CD28P10747 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CD28P10747 SNORD37.1-201ENST00000390968 65 ntBASIC0.98□□□□□ -2.25
CD28P10747 MTCO3P40-201ENST00000392516 676 ntBASIC0.98□□□□□ -2.25
CD28P10747 CALM2P3-201ENST00000400429 449 ntBASIC0.98□□□□□ -2.25
CD28P10747 RPS27P16-201ENST00000425758 201 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms