Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
VTNP04004 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VTNP04004 Y_RNA.61-201ENST00000362835 102 ntBASIC2.02□□□□□ -2.09
VTNP04004 RNU6-595P-201ENST00000363944 107 ntBASIC2.02□□□□□ -2.09
VTNP04004 SNORA25B-201ENST00000365507 128 ntBASIC2.02□□□□□ -2.09
VTNP04004 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
VTNP04004 Y_RNA.419-201ENST00000384041 102 ntBASIC2.02□□□□□ -2.09
VTNP04004 RNU6-541P-201ENST00000384709 110 ntBASIC2.02□□□□□ -2.09
VTNP04004 MIR1294-201ENST00000408503 142 ntBASIC2.02□□□□□ -2.09
VTNP04004 AC243428.1-201ENST00000421099 264 ntBASIC2.02□□□□□ -2.09
VTNP04004 AL603825.1-201ENST00000438481 80 ntBASIC2.02□□□□□ -2.09
VTNP04004 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.02□□□□□ -2.09
VTNP04004 AC022493.2-201ENST00000506122 481 ntBASIC2.02□□□□□ -2.09
VTNP04004 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.02□□□□□ -2.09
VTNP04004 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.02□□□□□ -2.09
VTNP04004 EIF4A1P12-201ENST00000551910 141 ntBASIC2.02□□□□□ -2.09
VTNP04004 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
VTNP04004 MIR3126-201ENST00000577443 74 ntBASIC2.02□□□□□ -2.09
VTNP04004 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VTNP04004 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.02□□□□□ -2.09
VTNP04004 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.02□□□□□ -2.09
VTNP04004 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
VTNP04004 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.02□□□□□ -2.09
VTNP04004 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.02□□□□□ -2.09
VTNP04004 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VTNP04004 RNU6-700P-201ENST00000391043 107 ntBASIC2.01□□□□□ -2.09
VTNP04004 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
VTNP04004 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
VTNP04004 RNA5SP270-201ENST00000411361 118 ntBASIC2.01□□□□□ -2.09
VTNP04004 AC092423.1-201ENST00000430165 186 ntBASIC2.01□□□□□ -2.09
VTNP04004 RN7SKP210-201ENST00000459176 261 ntBASIC2.01□□□□□ -2.09
VTNP04004 MIR2053-201ENST00000459295 91 ntBASIC2.01□□□□□ -2.09
VTNP04004 RNU7-87P-201ENST00000459343 62 ntBASIC2.01□□□□□ -2.09
VTNP04004 RPL30P10-201ENST00000488148 337 ntBASIC2.01□□□□□ -2.09
VTNP04004 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
VTNP04004 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
VTNP04004 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
VTNP04004 RNU7-193P-201ENST00000516723 65 ntBASIC2.01□□□□□ -2.09
VTNP04004 AC090517.1-201ENST00000569307 266 ntBASIC2.01□□□□□ -2.09
VTNP04004 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
VTNP04004 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
VTNP04004 SCARNA4-201ENST00000629045 128 ntBASIC2.01□□□□□ -2.09
VTNP04004 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VTNP04004 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VTNP04004 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.01□□□□□ -2.09
VTNP04004 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
VTNP04004 Y_RNA.146-201ENST00000363549 102 ntBASIC2□□□□□ -2.09
VTNP04004 RNU6-99P-201ENST00000364721 107 ntBASIC2□□□□□ -2.09
VTNP04004 Y_RNA.579-201ENST00000390939 94 ntBASIC2□□□□□ -2.09
VTNP04004 SNORA12.2-201ENST00000391040 156 ntBASIC2□□□□□ -2.09
VTNP04004 SNORA75.6-201ENST00000391318 127 ntBASIC2□□□□□ -2.09
VTNP04004 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2□□□□□ -2.09
VTNP04004 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2□□□□□ -2.09
VTNP04004 OR2AQ1P-201ENST00000451972 200 ntBASIC2□□□□□ -2.09
VTNP04004 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
VTNP04004 RPL17P19-201ENST00000489069 552 ntBASIC2□□□□□ -2.09
VTNP04004 RNU6-470P-201ENST00000515954 104 ntBASIC2□□□□□ -2.09
VTNP04004 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
VTNP04004 Y_RNA.706-201ENST00000516933 99 ntBASIC2□□□□□ -2.09
VTNP04004 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2□□□□□ -2.09
VTNP04004 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
VTNP04004 AC016727.2-201ENST00000603988 621 ntBASIC2□□□□□ -2.09
VTNP04004 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
VTNP04004 AL133255.1-201ENST00000606374 441 ntBASIC2□□□□□ -2.09
VTNP04004 AL355802.3-201ENST00000607571 545 ntBASIC2□□□□□ -2.09
VTNP04004 MIR1244-1-201ENST00000612829 85 ntBASIC2□□□□□ -2.09
VTNP04004 AC137590.2-201ENST00000619709 240 ntBASIC2□□□□□ -2.09
VTNP04004 AC012640.5-201ENST00000623897 319 ntBASIC2□□□□□ -2.09
VTNP04004 MIR1244-3-201ENST00000635744 85 ntBASIC2□□□□□ -2.09
VTNP04004 MIR1244-2-201ENST00000636449 85 ntBASIC2□□□□□ -2.09
VTNP04004 MIR1244-4-202ENST00000636813 85 ntBASIC2□□□□□ -2.09
VTNP04004 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.99□□□□□ -2.09
VTNP04004 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VTNP04004 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VTNP04004 SNORA18.2-201ENST00000383865 132 ntBASIC1.99□□□□□ -2.09
VTNP04004 Y_RNA.509-201ENST00000384506 99 ntBASIC1.99□□□□□ -2.09
VTNP04004 MIR153-2-201ENST00000385225 87 ntBASIC1.99□□□□□ -2.09
VTNP04004 AL627390.1-201ENST00000396055 340 ntBASIC1.99□□□□□ -2.09
VTNP04004 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
VTNP04004 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.99□□□□□ -2.09
VTNP04004 RNA5SP201-201ENST00000410316 124 ntBASIC1.99□□□□□ -2.09
VTNP04004 RNU2-48P-201ENST00000410694 191 ntBASIC1.99□□□□□ -2.09
VTNP04004 EDDM3CP-201ENST00000415977 425 ntBASIC1.99□□□□□ -2.09
VTNP04004 AC027575.1-201ENST00000481064 460 ntBASIC1.99□□□□□ -2.09
VTNP04004 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.99□□□□□ -2.09
VTNP04004 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.99□□□□□ -2.09
VTNP04004 AC034114.1-201ENST00000520293 285 ntBASIC1.99□□□□□ -2.09
VTNP04004 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
VTNP04004 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.99□□□□□ -2.09
VTNP04004 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
VTNP04004 ZNF204P-201ENST00000416749 2397 ntBASIC1.99□□□□□ -2.09
VTNP04004 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
VTNP04004 Y_RNA.187-201ENST00000363918 113 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNA5SP190-201ENST00000365222 118 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
VTNP04004 RNU6-26P-201ENST00000383985 107 ntBASIC1.98□□□□□ -2.09
VTNP04004 SNORA17.3-201ENST00000391159 129 ntBASIC1.98□□□□□ -2.09
VTNP04004 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.98□□□□□ -2.09
VTNP04004 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.98□□□□□ -2.09
VTNP04004 CBX3P6-201ENST00000430257 527 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms