Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-1106P-201ENST00000390845 107 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CTDNEP1O95476 Y_RNA.619-201ENST00000410951 90 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 RNU6-373P-201ENST00000411247 98 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 EIF1P1-201ENST00000421436 341 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 FTH1P25-201ENST00000447665 469 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 NFU1P2-201ENST00000448700 469 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 U8.21-201ENST00000459536 136 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 RNU6-1098P-201ENST00000516772 96 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 RNU6-273P-201ENST00000516937 96 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 EIF4A1P12-201ENST00000551910 141 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.35□□□□□ -2.19
CTDNEP1O95476 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 AL133216.2-202ENST00000634512 349 ntBASIC1.35□□□□□ -2.19
CTDNEP1O95476 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CTDNEP1O95476 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CTDNEP1O95476 RNU6-562P-201ENST00000362731 107 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 Y_RNA.157-201ENST00000363638 102 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 U3.9-201ENST00000363823 204 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 Y_RNA.301-201ENST00000364990 103 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 RNU6-1286P-201ENST00000383871 107 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 RNU6-784P-201ENST00000384330 106 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 SNORD14D-201ENST00000384390 87 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 Y_RNA.573-201ENST00000384763 105 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 MIR208B-201ENST00000401172 77 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 RNA5SP118-201ENST00000410385 109 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 AL590556.1-201ENST00000423231 483 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 FGF7P6-202ENST00000451282 293 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 AC079354.2-201ENST00000453523 154 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 MTND4LP26-201ENST00000518144 282 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.34□□□□□ -2.19
CTDNEP1O95476 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
CTDNEP1O95476 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
CTDNEP1O95476 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.2
CTDNEP1O95476 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.2
CTDNEP1O95476 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.34□□□□□ -2.2
CTDNEP1O95476 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
CTDNEP1O95476 MIR378A-201ENST00000362177 66 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 Y_RNA.86-201ENST00000363020 111 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 Y_RNA.332-201ENST00000365271 113 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 SNORA32.2-201ENST00000384049 122 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 RNU6-306P-201ENST00000384617 107 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 MIR597-201ENST00000384968 97 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 MIR30A-201ENST00000385092 71 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC004866.1-201ENST00000411748 78 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.33□□□□□ -2.2
CTDNEP1O95476 Z82205.1-201ENST00000428456 297 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC130509.1-201ENST00000464158 433 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.33□□□□□ -2.2
CTDNEP1O95476 RNU4-49P-201ENST00000516080 140 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CTDNEP1O95476 FGF7P1-201ENST00000582820 288 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 CYP2C61P-201ENST00000604072 290 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 AC009033.1-201ENST00000624279 431 ntBASIC1.33□□□□□ -2.2
CTDNEP1O95476 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNU1-76P-201ENST00000362903 159 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNU4-56P-201ENST00000364700 142 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNU6-968P-201ENST00000384076 107 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 MIR517A-201ENST00000385001 87 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNU6-1093P-201ENST00000391194 107 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNA5SP501-201ENST00000410990 112 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 Z82188.1-201ENST00000436709 154 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 PCMTD1P1-201ENST00000455560 355 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 RPL23AP75-201ENST00000491601 451 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 RNA5SP490-201ENST00000517141 136 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 AC016256.1-201ENST00000547971 354 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.32□□□□□ -2.2
CTDNEP1O95476 AC018638.8-201ENST00000588755 281 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 AP003465.2-201ENST00000602571 373 ntBASIC1.32□□□□□ -2.2
CTDNEP1O95476 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms