Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.83-201ENST00000363005 113 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 RNU6-793P-201ENST00000384233 104 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 CBX3P9-201ENST00000402326 552 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.53□□□□□ -1.84
VAMP4O75379 AC138623.1-201ENST00000418060 216 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.53□□□□□ -1.84
VAMP4O75379 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.53□□□□□ -1.84
VAMP4O75379 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 RPL23AP58-201ENST00000440453 469 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 AC108938.1-201ENST00000451204 136 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.53□□□□□ -1.84
VAMP4O75379 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.53□□□□□ -1.84
VAMP4O75379 AL162424.1-201ENST00000602325 221 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 MZT1P2-201ENST00000604387 248 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 AL034555.1-201ENST00000604816 211 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 AL590240.4-201ENST00000616908 390 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VAMP4O75379 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 AC099654.7-201ENST00000635788 2127 ntBASIC3.53□□□□□ -1.84
VAMP4O75379 MIR26A1-201ENST00000362205 77 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 MIR410-201ENST00000362222 80 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 Y_RNA.76-201ENST00000362931 109 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 Y_RNA.199-201ENST00000364014 102 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 Y_RNA.446-201ENST00000384178 104 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 MIR208B-201ENST00000401172 77 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 AL133475.1-201ENST00000404414 305 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 RNA5SP201-201ENST00000410316 124 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 RNA5SP21-201ENST00000410917 96 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 AIMP1P2-201ENST00000425294 312 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 MTCO1P5-201ENST00000433573 344 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 AC103975.1-201ENST00000482506 483 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 SNORA31.21-201ENST00000517180 77 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 AC018448.1-201ENST00000552843 316 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
VAMP4O75379 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.52□□□□□ -1.85
VAMP4O75379 MIR4282-201ENST00000583613 67 ntBASIC3.52□□□□□ -1.85
VAMP4O75379 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.52□□□□□ -1.85
VAMP4O75379 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.52□□□□□ -1.85
VAMP4O75379 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.40-201ENST00000362645 93 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.122-201ENST00000363331 96 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.275-201ENST00000364726 110 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.331-201ENST00000365267 102 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 MIR147B-201ENST00000390185 80 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.51□□□□□ -1.85
VAMP4O75379 AC244505.4-201ENST00000434905 287 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 SSXP5-201ENST00000443473 287 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.644-201ENST00000459006 113 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 Y_RNA.674-201ENST00000516362 113 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.51□□□□□ -1.85
VAMP4O75379 MIR3605-201ENST00000583214 100 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 uc_338.14-201ENST00000613162 166 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 PCGEM1.1-201ENST00000613431 131 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 AC006001.4-201ENST00000622243 395 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.51□□□□□ -1.85
VAMP4O75379 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.51□□□□□ -1.85
VAMP4O75379 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAMP4O75379 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.51□□□□□ -1.85
VAMP4O75379 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAMP4O75379 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.5□□□□□ -1.85
VAMP4O75379 SNORA25.1-201ENST00000362326 128 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 RNU6-740P-201ENST00000364734 105 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 RNY4P28-201ENST00000365281 93 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 RNU6-1310P-201ENST00000384153 107 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 RNU6-378P-201ENST00000384324 107 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 Y_RNA.498-201ENST00000384460 102 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AL031121.1-201ENST00000406553 254 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 MIR1289-1-201ENST00000408836 144 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 ELOCP21-201ENST00000412558 336 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.5□□□□□ -1.85
VAMP4O75379 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.5□□□□□ -1.85
VAMP4O75379 UQCRBP2-201ENST00000447827 297 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AC005042.3-201ENST00000453230 174 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.5□□□□□ -1.85
VAMP4O75379 SNORA27.4-201ENST00000516650 95 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.5□□□□□ -1.85
VAMP4O75379 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.5□□□□□ -1.85
VAMP4O75379 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.5□□□□□ -1.85
VAMP4O75379 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.5□□□□□ -1.85
VAMP4O75379 CBX3P4-201ENST00000538909 354 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 MIR7106-201ENST00000612419 65 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 IGHVIII-44-202ENST00000636235 289 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
VAMP4O75379 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
VAMP4O75379 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP4O75379 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP4O75379 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.49□□□□□ -1.85
VAMP4O75379 MIR411-201ENST00000362239 96 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.82-201ENST00000363000 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.92-201ENST00000363043 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.235-201ENST00000364412 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.306-201ENST00000365015 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.312-201ENST00000365089 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.322-201ENST00000365151 102 ntBASIC3.49□□□□□ -1.85
VAMP4O75379 Y_RNA.383-201ENST00000383855 97 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms