Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AL356157.2-201ENST00000605122 111 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AC009994.1-201ENST00000606889 253 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AL121890.5-201ENST00000620848 304 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.03□□□□□ -2.24
NPHP4O75161 AC243829.3-201ENST00000622177 108 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 SNORA4.2-201ENST00000365313 147 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 RNU6-606P-201ENST00000384721 111 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AL117342.1-201ENST00000404861 406 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 PIGFP2-201ENST00000421400 651 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AC073910.1-201ENST00000445047 438 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AC016717.1-201ENST00000448918 286 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 C1DP4-201ENST00000455429 424 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 HAR1A.1-201ENST00000459583 118 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.02□□□□□ -2.25
NPHP4O75161 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.02□□□□□ -2.25
NPHP4O75161 AC079140.3-201ENST00000511111 550 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
NPHP4O75161 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.02□□□□□ -2.25
NPHP4O75161 AC019288.1-201ENST00000557918 224 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 MTCO3P23-201ENST00000561363 289 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AC008147.4-201ENST00000617570 1204 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 uc_338.11-201ENST00000619132 160 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 AL390237.1-201ENST00000404226 1415 ntBASIC1.02□□□□□ -2.25
NPHP4O75161 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
NPHP4O75161 SNORA63D-201ENST00000364359 132 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 Y_RNA.381-201ENST00000365666 102 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
NPHP4O75161 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.01□□□□□ -2.25
NPHP4O75161 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.01□□□□□ -2.25
NPHP4O75161 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.01□□□□□ -2.25
NPHP4O75161 MTCO2P11-201ENST00000431069 680 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 AC002486.1-201ENST00000435098 391 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.01□□□□□ -2.25
NPHP4O75161 RNU7-167P-201ENST00000459160 62 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 MTND1P22-201ENST00000510572 951 ntBASIC1.01□□□□□ -2.25
NPHP4O75161 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.01□□□□□ -2.25
NPHP4O75161 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.01□□□□□ -2.25
NPHP4O75161 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1□□□□□ -2.25
NPHP4O75161 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
NPHP4O75161 SNORA33-201ENST00000363664 130 ntBASIC1□□□□□ -2.25
NPHP4O75161 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
NPHP4O75161 RNU2-29P-201ENST00000410423 189 ntBASIC1□□□□□ -2.25
NPHP4O75161 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1□□□□□ -2.25
NPHP4O75161 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1□□□□□ -2.25
NPHP4O75161 AC090960.1-201ENST00000421072 306 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1□□□□□ -2.25
NPHP4O75161 AC132479.1-201ENST00000449160 144 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC022364.2-201ENST00000457963 554 ntBASIC1□□□□□ -2.25
NPHP4O75161 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC011406.1-201ENST00000512440 370 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC069113.1-201ENST00000517763 267 ntBASIC1□□□□□ -2.25
NPHP4O75161 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1□□□□□ -2.25
NPHP4O75161 AL137161.1-201ENST00000532231 390 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC090115.3-201ENST00000553218 849 ntBASIC1□□□□□ -2.25
NPHP4O75161 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
NPHP4O75161 U2.17-201ENST00000611454 95 ntBASIC1□□□□□ -2.25
NPHP4O75161 AC005520.5-201ENST00000613926 164 ntBASIC1□□□□□ -2.25
NPHP4O75161 Y_RNA.159-201ENST00000363674 87 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 RNA5SP499-201ENST00000363982 119 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 SNORA25.8-201ENST00000364831 128 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 Y_RNA.399-201ENST00000383955 105 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AL161935.2-201ENST00000414627 60 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 TOMM22P2-201ENST00000430735 237 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AC010486.2-201ENST00000505572 483 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.99□□□□□ -2.25
NPHP4O75161 RNU6-567P-201ENST00000516746 107 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.99□□□□□ -2.25
NPHP4O75161 HIF1AP1-201ENST00000553642 175 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 MTATP6P24-201ENST00000576835 677 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AC015688.6-201ENST00000577737 104 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AC040904.1-201ENST00000590850 223 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 AL365434.2-201ENST00000607979 234 ntBASIC0.99□□□□□ -2.25
NPHP4O75161 Y_RNA.169-201ENST00000363745 96 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.98□□□□□ -2.25
NPHP4O75161 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 USP9YP14-201ENST00000430663 563 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MTND4P32-201ENST00000437189 1237 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 AC117454.1-201ENST00000491120 168 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 SNORD60.2-201ENST00000516883 86 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 RNU6-856P-201ENST00000516959 98 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 AC064807.4-201ENST00000607201 407 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 ELL2P3-201ENST00000457883 1602 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MIR194-1-201ENST00000384892 85 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.98□□□□□ -2.25
NPHP4O75161 MTCO1P21-201ENST00000416634 589 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MTATP6P18-201ENST00000417994 673 ntBASIC0.98□□□□□ -2.25
NPHP4O75161 MTND3P9-201ENST00000429526 346 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms