Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-324P-201ENST00000363957 106 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AC009963.1-201ENST00000417265 157 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCD1O75127 AIMP1P2-201ENST00000425294 312 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 BTF3P11-201ENST00000426582 477 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AL353705.1-201ENST00000433468 480 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AC004386.2-201ENST00000441858 148 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 snoU13.14-201ENST00000459372 104 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 RPL23AP70-201ENST00000483361 460 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 RNU1-117P-201ENST00000517041 158 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AC025281.1-201ENST00000567026 265 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 MIR4513-201ENST00000581077 86 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 MIR6129-201ENST00000616087 109 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 AC005562.2-201ENST00000618264 111 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.2□□□□□ -1.74
PTCD1O75127 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCD1O75127 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCD1O75127 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCD1O75127 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PTCD1O75127 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTCD1O75127 RNU6-1272P-201ENST00000362776 107 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 U3.9-201ENST00000363823 204 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 Y_RNA.420-201ENST00000384043 110 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCD1O75127 RNU6-659P-201ENST00000516454 104 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCD1O75127 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCD1O75127 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCD1O75127 EIF4A1P12-201ENST00000551910 141 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCD1O75127 MIR4738-201ENST00000579134 87 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 MIR5006-201ENST00000583027 110 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCD1O75127 AL391813.1-201ENST00000603098 260 ntBASIC4.19□□□□□ -1.74
PTCD1O75127 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCD1O75127 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCD1O75127 RNU6-655P-201ENST00000362858 107 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 SNORD87-201ENST00000364849 89 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 RNU6-275P-201ENST00000364910 107 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 RNU4-17P-201ENST00000365598 141 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 MIR708-201ENST00000390708 88 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AP000567.1-201ENST00000406413 156 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AC126124.2-201ENST00000413542 321 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 RPL30P13-201ENST00000418873 348 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCD1O75127 AL031183.1-201ENST00000457667 207 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AC008885.1-201ENST00000514930 301 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 MIR2682-201ENST00000580305 110 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 UBL5P2-201ENST00000583788 219 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCD1O75127 AC025946.2-201ENST00000603398 234 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 SNORD11B-201ENST00000607707 90 ntBASIC4.18□□□□□ -1.74
PTCD1O75127 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCD1O75127 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCD1O75127 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PTCD1O75127 AC010680.1-201ENST00000590024 3590 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PTCD1O75127 MTND5P32-201ENST00000560711 1802 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 RNU6-1210P-201ENST00000363775 107 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 Y_RNA.329-201ENST00000365209 107 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 SNORA18.2-201ENST00000383865 132 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 RNU6-1264P-201ENST00000383891 107 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 RNU6-1248P-201ENST00000391096 64 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCD1O75127 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCD1O75127 RPL31P41-201ENST00000477967 372 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCD1O75127 SNORA31.21-201ENST00000517180 77 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 HSPE1P18-201ENST00000517602 280 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCD1O75127 Y_RNA.802-201ENST00000614892 130 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 TCL6_2.1-201ENST00000615162 119 ntBASIC4.17□□□□□ -1.74
PTCD1O75127 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCD1O75127 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCD1O75127 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTCD1O75127 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCD1O75127 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PTCD1O75127 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCD1O75127 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCD1O75127 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCD1O75127 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCD1O75127 snoU2_19.1-201ENST00000362361 80 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 Y_RNA.121-201ENST00000363309 113 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 RNU6-1056P-201ENST00000383996 107 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 RNU1-57P-201ENST00000384491 166 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 AC004866.1-201ENST00000411748 78 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCD1O75127 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCD1O75127 RNU7-107P-201ENST00000459121 61 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 Y_RNA.637-201ENST00000459424 114 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 RPL36AP48-201ENST00000485521 314 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 AC127455.1-201ENST00000565496 145 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 MIR4679-2-201ENST00000578358 77 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 AL670379.2-201ENST00000604983 252 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 uc_338.1-201ENST00000612113 180 ntBASIC4.16□□□□□ -1.74
PTCD1O75127 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCD1O75127 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCD1O75127 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.15□□□□□ -1.74
PTCD1O75127 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCD1O75127 RNU6-834P-201ENST00000362367 110 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms