Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 RNU5A-6P-201ENST00000384136 116 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AF228730.1-201ENST00000397972 663 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 CDK8P2-201ENST00000415020 547 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AC090960.1-201ENST00000421072 306 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.12□□□□□ -2.23
CHMP2AO43633 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.12□□□□□ -2.23
CHMP2AO43633 RNU6-261P-201ENST00000459506 102 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AF186996.7-201ENST00000492781 209 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 RPS23P5-201ENST00000495419 428 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AC091133.4-201ENST00000511142 308 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 RNU6-189P-201ENST00000516120 101 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 RNU6-1069P-201ENST00000516612 133 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 RNA5SP384-201ENST00000516615 116 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AC005520.5-201ENST00000613926 164 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 AC008147.4-201ENST00000617570 1204 ntBASIC1.12□□□□□ -2.23
CHMP2AO43633 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHMP2AO43633 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHMP2AO43633 SNORD33-201ENST00000362761 85 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 Y_RNA.372-201ENST00000365599 102 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 RNU6-1026P-201ENST00000384465 108 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 RNA5SP247-201ENST00000411181 105 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
CHMP2AO43633 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.11□□□□□ -2.23
CHMP2AO43633 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 USP9YP14-201ENST00000430663 563 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AC004386.2-201ENST00000441858 148 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 MTCO3P8-201ENST00000453691 755 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AC083904.1-201ENST00000487828 231 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 RN7SKP298-201ENST00000515950 94 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.11□□□□□ -2.23
CHMP2AO43633 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.11□□□□□ -2.23
CHMP2AO43633 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.11□□□□□ -2.23
CHMP2AO43633 AC087683.1-201ENST00000591187 441 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 RN7SKP299-201ENST00000606679 301 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AC092807.2-201ENST00000609367 243 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 FAM157A-202ENST00000615155 405 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 AC005609.4-201ENST00000625071 447 ntBASIC1.11□□□□□ -2.23
CHMP2AO43633 FER-210ENST00000628534 558 ntTSL 5 BASIC1.11□□□□□ -2.23
CHMP2AO43633 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHMP2AO43633 RNU6-227P-201ENST00000362865 103 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 RNU5B-2P-201ENST00000363036 113 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 Y_RNA.226-201ENST00000364337 114 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 SNORD114-22-201ENST00000365423 72 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 RNU6-1329P-201ENST00000365664 107 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 SNORA69-201ENST00000383895 132 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 RNY3P9-201ENST00000384727 106 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 RNU6-325P-201ENST00000411132 105 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.1□□□□□ -2.23
CHMP2AO43633 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
CHMP2AO43633 AL445305.1-201ENST00000432577 575 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.1□□□□□ -2.23
CHMP2AO43633 HMGB1P29-201ENST00000505659 499 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 RNU6-1332P-201ENST00000516666 104 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 SNORD60.2-201ENST00000516883 86 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AC026407.1-201ENST00000518369 204 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AC104383.1-201ENST00000530297 370 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 CBX3P8-201ENST00000532412 525 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.1□□□□□ -2.23
CHMP2AO43633 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.1□□□□□ -2.23
CHMP2AO43633 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
CHMP2AO43633 MIR3611-201ENST00000584484 83 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AL356157.2-201ENST00000605122 111 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 MIR6504-201ENST00000613520 61 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AC103705.1-201ENST00000619013 241 ntBASIC1.1□□□□□ -2.23
CHMP2AO43633 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.1□□□□□ -2.23
CHMP2AO43633 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHMP2AO43633 RNU6-1019P-201ENST00000364424 107 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 CALM2P3-201ENST00000400429 449 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 MTND3P16-201ENST00000452205 344 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.09□□□□□ -2.23
CHMP2AO43633 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.09□□□□□ -2.23
CHMP2AO43633 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
CHMP2AO43633 AC010486.3-201ENST00000511602 785 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 AC011406.1-201ENST00000512440 370 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 AC010493.1-201ENST00000513479 292 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 RNA5SP481-201ENST00000516814 122 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.09□□□□□ -2.23
CHMP2AO43633 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CHMP2AO43633 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.09□□□□□ -2.23
CHMP2AO43633 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 AC004492.1-201ENST00000607036 742 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 OR5AK4P-201ENST00000635912 903 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 MIR6863-201ENST00000636112 90 ntBASIC1.09□□□□□ -2.23
CHMP2AO43633 RNU6-1252P-201ENST00000363054 104 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RNU6-1119P-201ENST00000384349 108 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RNU6-1065P-201ENST00000384513 106 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CHMP2AO43633 RNA5SP494-201ENST00000410653 129 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RNU6-1068P-201ENST00000410958 103 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms