Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 Y_RNA.481-201ENST00000384373 102 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 RNU6-1235P-201ENST00000384559 107 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 COX6CP10-201ENST00000416832 224 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN3O15551 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN3O15551 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.41□□□□□ -2.18
CLDN3O15551 AC073910.1-201ENST00000445047 438 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AC009237.7-201ENST00000447357 229 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.41□□□□□ -2.18
CLDN3O15551 RNU6-498P-201ENST00000459468 107 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 RNU6-1208P-201ENST00000459588 107 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 MTND1P15-201ENST00000579262 949 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AC146944.4-201ENST00000602697 718 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AL353149.1-201ENST00000610667 244 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AL158209.2-201ENST00000619266 216 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 MIR338-201ENST00000636369 67 ntBASIC1.41□□□□□ -2.18
CLDN3O15551 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.4□□□□□ -2.19
CLDN3O15551 RNU6-1305P-201ENST00000364353 104 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 RNU6-975P-201ENST00000384296 105 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 EIF4E2P1-201ENST00000393781 255 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 MRPL35P1-201ENST00000404272 572 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 MIR320B2-201ENST00000408479 138 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AC092473.1-201ENST00000441098 221 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AC074290.1-201ENST00000448883 135 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 OR2AQ1P-201ENST00000451972 200 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 MTCO1P29-201ENST00000496868 288 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN3O15551 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN3O15551 AL158211.1-201ENST00000566763 763 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 SNRPGP20-201ENST00000604477 205 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AL359821.1-201ENST00000605519 182 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 MIR8076-201ENST00000611401 83 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AC006001.4-201ENST00000622243 395 ntBASIC1.4□□□□□ -2.19
CLDN3O15551 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.39□□□□□ -2.19
CLDN3O15551 MTND4P5-201ENST00000435821 1374 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 SNORD33-201ENST00000362761 85 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 RNU6-1085P-201ENST00000363576 107 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 RNU6-1119P-201ENST00000384349 108 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 AF186996.7-201ENST00000492781 209 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.39□□□□□ -2.19
CLDN3O15551 MTND1P35-201ENST00000526739 508 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN3O15551 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN3O15551 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN3O15551 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN3O15551 AC068792.1-201ENST00000621354 417 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 AC097520.1-201ENST00000624435 385 ntBASIC1.39□□□□□ -2.19
CLDN3O15551 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 snoU2-30.2-201ENST00000362805 70 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 SNORA72.2-201ENST00000365028 127 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLDN3O15551 MIR1253-201ENST00000408273 105 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 AL161935.2-201ENST00000414627 60 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.38□□□□□ -2.19
CLDN3O15551 RNU6-1053P-201ENST00000515930 101 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 RNU6-1146P-201ENST00000516282 102 ntBASIC1.38□□□□□ -2.19
CLDN3O15551 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.38□□□□□ -2.19
CLDN3O15551 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.38□□□□□ -2.19
CLDN3O15551 MTND5P35-201ENST00000557537 1720 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 MIR450B-201ENST00000401182 78 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 RNU6-57P-201ENST00000411348 103 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AC004866.1-201ENST00000411748 78 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.37□□□□□ -2.19
CLDN3O15551 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.37□□□□□ -2.19
CLDN3O15551 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
CLDN3O15551 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN3O15551 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN3O15551 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN3O15551 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 RNU7-34P-201ENST00000459394 64 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AC083904.1-201ENST00000487828 231 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 Y_RNA.688-201ENST00000516565 95 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 MIR4709-201ENST00000577272 72 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AC073413.2-201ENST00000604332 360 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 AC073534.2-201ENST00000620377 381 ntBASIC1.37□□□□□ -2.19
CLDN3O15551 MTND5P26-201ENST00000426018 1752 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 ZNF204P-201ENST00000416749 2397 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 SNORA4.2-201ENST00000365313 147 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 RNU6-417P-201ENST00000384712 107 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 RNA5SP323-201ENST00000391094 133 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 AC007215.1-201ENST00000464893 276 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 RPS26P45-201ENST00000471748 340 ntBASIC1.36□□□□□ -2.19
CLDN3O15551 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms