Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 DPRXP1-201ENST00000426312 460 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 SEPT7P5-201ENST00000434048 306 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 STAG3L5P-204ENST00000443759 179 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 MTCO2P7-201ENST00000446518 666 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 PCNPP5-201ENST00000452246 481 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC245047.8-201ENST00000456455 284 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC022364.2-201ENST00000457963 554 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC016925.1-201ENST00000458303 298 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 snoU13.27-201ENST00000459278 104 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AL163973.1-201ENST00000484753 577 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 MTND4LP26-201ENST00000518144 282 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 TPRKBP2-201ENST00000565969 475 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC007014.2-201ENST00000615581 479 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 AC010975.3-201ENST00000618727 978 ntBASIC-0.11□□□□□ -2.43
CACNA1AO00555 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.11□□□□□ -2.43
CACNA1AO00555 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CACNA1AO00555 RNA5SP264-201ENST00000363115 107 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-744P-201ENST00000365557 107 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SNORA32.2-201ENST00000384049 122 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-549P-201ENST00000384433 107 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR544A-201ENST00000384855 91 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR196A2-201ENST00000385189 110 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR644A-201ENST00000385262 94 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SNORA12.1-201ENST00000390873 148 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SNORD65C-201ENST00000390962 71 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-932P-201ENST00000391108 106 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 NFU1P2-201ENST00000448700 469 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CACNA1AO00555 MTCO3P10-201ENST00000455912 772 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 RPS23P5-201ENST00000495419 428 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CACNA1AO00555 LRRC34P1-201ENST00000542742 915 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL133153.1-201ENST00000557756 303 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC138869.1-201ENST00000568623 124 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR4666A-201ENST00000580160 79 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL162424.1-201ENST00000602325 221 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC080078.2-201ENST00000603766 501 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL158042.1-201ENST00000605338 460 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-487P-201ENST00000365430 104 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SMIM11P1-201ENST00000369586 178 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-622P-201ENST00000384272 103 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR520G-201ENST00000385064 90 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR520H-201ENST00000385126 88 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MIR1305-201ENST00000408300 86 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNA5SP504-201ENST00000410676 117 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL162725.1-201ENST00000435405 301 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 COX7BP2-201ENST00000437976 242 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MTCO1P19-201ENST00000443487 500 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC073910.1-201ENST00000445047 438 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MTCO1P27-201ENST00000448269 226 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 ZNF886P-201ENST00000450781 723 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 SUMO2P18-201ENST00000518873 252 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 MTCO3P15-201ENST00000526563 574 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC011979.2-201ENST00000527568 352 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.12□□□□□ -2.43
CACNA1AO00555 AL359075.3-201ENST00000613288 217 ntBASIC-0.12□□□□□ -2.43
CACNA1AO00555 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-212P-201ENST00000362642 104 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-395P-201ENST00000365662 106 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 MIR573-201ENST00000384964 99 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNA5SP390-201ENST00000410191 113 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-994P-201ENST00000410507 111 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 AL139396.1-201ENST00000421137 167 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 AC010154.1-201ENST00000425857 269 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.13□□□□□ -2.43
CACNA1AO00555 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.13□□□□□ -2.43
CACNA1AO00555 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.13□□□□□ -2.43
CACNA1AO00555 ART2BP-201ENST00000453501 499 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 MTND2P6-201ENST00000455337 1030 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.13□□□□□ -2.43
CACNA1AO00555 AC023632.1-201ENST00000518463 375 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms