Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-975P-201ENST00000384296 105 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-424P-201ENST00000384367 105 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-929P-201ENST00000384429 107 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 TIMM9P2-201ENST00000419324 266 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC005002.2-201ENST00000438228 269 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC004854.1-201ENST00000440356 349 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC093850.1-201ENST00000454121 251 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 SNRPGP7-201ENST00000469016 106 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.49□□□□□ -2.49
HMGN4O00479 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.49□□□□□ -2.49
HMGN4O00479 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.49□□□□□ -2.49
HMGN4O00479 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.49□□□□□ -2.49
HMGN4O00479 AP002453.2-201ENST00000533503 320 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.49□□□□□ -2.49
HMGN4O00479 AC078795.3-201ENST00000602913 472 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 SNORA28-201ENST00000606769 126 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC009994.1-201ENST00000606889 253 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AP000943.4-201ENST00000622912 357 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 U4.7-201ENST00000638126 106 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 AC121333.1-201ENST00000567488 2709 ntBASIC-0.49□□□□□ -2.49
HMGN4O00479 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 MIR520G-201ENST00000385064 90 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 MIR520H-201ENST00000385126 88 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.5□□□□□ -2.49
HMGN4O00479 AC106883.1-201ENST00000418805 562 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.5□□□□□ -2.49
HMGN4O00479 CALM2P4-201ENST00000430810 426 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 AC005534.2-201ENST00000431047 433 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.5□□□□□ -2.49
HMGN4O00479 HMGN1P10-201ENST00000474557 553 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 AC079382.1-201ENST00000493346 557 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.5□□□□□ -2.49
HMGN4O00479 RNA5SP94-201ENST00000516917 108 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 MIR5708-201ENST00000579723 85 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 7SK.7-201ENST00000603504 247 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 Z99497.2-201ENST00000603634 310 ntBASIC-0.5□□□□□ -2.49
HMGN4O00479 SNORA25.3-201ENST00000363205 127 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 SNORA8.2-201ENST00000384372 139 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 MIR578-201ENST00000384828 96 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 MIR593-201ENST00000384856 100 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 MIR643-201ENST00000385267 97 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 MIR549A-201ENST00000385268 96 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 RNU6-747P-201ENST00000390928 104 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 RNU6-241P-201ENST00000391148 104 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 U8.16-201ENST00000391279 133 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 AC016909.1-201ENST00000415916 166 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 MTND3P17-201ENST00000416968 344 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.51□□□□□ -2.49
HMGN4O00479 SNORD4A-201ENST00000459174 72 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 AP000870.1-201ENST00000472927 406 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.51□□□□□ -2.49
HMGN4O00479 RN7SKP164-201ENST00000516138 266 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 AC026616.1-201ENST00000523157 525 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 OR8K2P-201ENST00000524645 927 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 DEFB131E-202ENST00000602581 683 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 uc_338.6-201ENST00000613544 171 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 AC005520.5-201ENST00000613926 164 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 AL109933.3-201ENST00000619095 188 ntBASIC-0.51□□□□□ -2.49
HMGN4O00479 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.51□□□□□ -2.49
HMGN4O00479 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
HMGN4O00479 RNA5SP325-201ENST00000363756 130 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 MIR106A-201ENST00000384870 81 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNU2-59P-201ENST00000410482 191 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNA5SP127-201ENST00000411051 133 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RPS3AP3-201ENST00000411933 242 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.52□□□□□ -2.49
HMGN4O00479 MRPS10P2-201ENST00000431226 381 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RPL23AP30-201ENST00000432419 501 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 MTND4P15-201ENST00000437913 1033 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 AC010468.3-201ENST00000508225 458 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RN7SKP287-201ENST00000516546 266 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNA5SP268-201ENST00000516828 124 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 AC105185.1-201ENST00000518705 535 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.52□□□□□ -2.49
HMGN4O00479 AL512347.1-201ENST00000566420 503 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 MIR548AO-201ENST00000579992 96 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 Z99289.3-201ENST00000605586 594 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 AL359697.1-201ENST00000624879 587 ntBASIC-0.52□□□□□ -2.49
HMGN4O00479 RNU6-960P-201ENST00000364056 120 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 snoZ40.1-201ENST00000364540 72 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 RNU6-756P-201ENST00000383997 107 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC096531.1-201ENST00000419107 107 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.53□□□□□ -2.49
HMGN4O00479 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.53□□□□□ -2.49
HMGN4O00479 AC006366.1-201ENST00000422002 759 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AC016632.1-201ENST00000503994 196 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 RNA5SP480-201ENST00000516840 109 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 RNU11-2P-201ENST00000516898 142 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
HMGN4O00479 AK6P2-201ENST00000549020 471 ntBASIC-0.53□□□□□ -2.49
HMGN4O00479 AL158211.1-201ENST00000566763 763 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms