Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.11□□□□□ -2.23
SMCO2A6NFE2 FGF7P1-201ENST00000582820 288 ntBASIC1.11□□□□□ -2.23
SMCO2A6NFE2 MIR4753-201ENST00000585119 83 ntBASIC1.11□□□□□ -2.23
SMCO2A6NFE2 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
SMCO2A6NFE2 AC009033.1-201ENST00000624279 431 ntBASIC1.11□□□□□ -2.23
SMCO2A6NFE2 SNORA33-201ENST00000363664 130 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 MIR586-201ENST00000385035 97 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 NFU1P2-201ENST00000448700 469 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AC010493.1-201ENST00000513479 292 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AL512310.8-201ENST00000550183 120 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 CPDP1-201ENST00000579660 283 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 AL354950.2-201ENST00000617939 290 ntBASIC1.1□□□□□ -2.23
SMCO2A6NFE2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SMCO2A6NFE2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AL606923.1-201ENST00000406616 190 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC073464.1-201ENST00000429823 534 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC016717.1-201ENST00000448918 286 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 TPTE2P5-203ENST00000458118 728 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC091133.4-201ENST00000511142 308 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC024995.1-201ENST00000523014 93 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.09□□□□□ -2.23
SMCO2A6NFE2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AL118558.2-201ENST00000556294 238 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC004223.2-201ENST00000590309 544 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AL355802.3-201ENST00000607571 545 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 AC017083.3-201ENST00000609955 700 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
SMCO2A6NFE2 Y_RNA.167-201ENST00000363735 109 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 RNU6-38P-201ENST00000384085 107 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AL606489.2-201ENST00000433886 234 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 MTCO3P8-201ENST00000453691 755 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 U8.21-201ENST00000459536 136 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AC114982.1-201ENST00000469402 321 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 MIR4709-201ENST00000577272 72 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 MIR5006-201ENST00000583027 110 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 MIR5692C1-201ENST00000585309 91 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 MZT1P2-201ENST00000604387 248 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 AC008873.1-201ENST00000625051 138 ntBASIC1.08□□□□□ -2.24
SMCO2A6NFE2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMCO2A6NFE2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 RNU6-1317P-201ENST00000364582 104 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 RNU6-784P-201ENST00000384330 106 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 RNA5SP494-201ENST00000410653 129 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 MTCO1P20-201ENST00000425366 358 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 MTND3P9-201ENST00000429526 346 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AF186996.7-201ENST00000492781 209 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 MRPS36P4-201ENST00000534436 298 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AL157687.1-201ENST00000554853 619 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 MIR3664-201ENST00000579074 99 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AP000907.4-201ENST00000604143 237 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AP001330.5-201ENST00000607176 411 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 AL158063.1-201ENST00000615349 536 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 U6.108-201ENST00000637764 58 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
SMCO2A6NFE2 MTND4P5-201ENST00000435821 1374 ntBASIC1.07□□□□□ -2.24
SMCO2A6NFE2 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC016909.1-201ENST00000415916 166 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AL359672.1-201ENST00000442302 409 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 RPS26P45-201ENST00000471748 340 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 RNU6-1146P-201ENST00000516282 102 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.06□□□□□ -2.24
SMCO2A6NFE2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
SMCO2A6NFE2 TPRKBP2-201ENST00000565969 475 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC100830.2-201ENST00000581636 240 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC136443.5-201ENST00000603741 370 ntBASIC1.06□□□□□ -2.24
SMCO2A6NFE2 AC073114.1-201ENST00000612027 490 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms