Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AP001486.2-201ENST00000561652 5113 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RNU4-17P-201ENST00000365598 141 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.400-201ENST00000383963 111 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AC245291.1-201ENST00000419501 328 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RPS27AP9-201ENST00000477681 438 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AC006445.2-201ENST00000510061 472 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RNU5F-2P-201ENST00000516066 82 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-479P-201ENST00000516348 105 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AP002001.1-203ENST00000534002 267 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 MIR3145-201ENST00000580727 82 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 DEFB117-201ENST00000602356 141 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 AC006380.1-201ENST00000603598 186 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HCFC2Q9Y5Z7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNU4-84P-201ENST00000364200 139 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-449P-201ENST00000383914 107 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 MIR208B-201ENST00000401172 77 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 CBX3P9-201ENST00000402326 552 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNA5SP201-201ENST00000410316 124 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNU2-51P-201ENST00000410708 197 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 BTF3P11-201ENST00000426582 477 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RPS15AP5-201ENST00000436276 388 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-344P-201ENST00000516635 111 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 AC105137.2-201ENST00000569073 466 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCFC2Q9Y5Z7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 SNORD116-18-201ENST00000383961 92 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-959P-201ENST00000384671 107 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.568-201ENST00000384742 113 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 AC107626.1-201ENST00000471084 183 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-436P-201ENST00000516171 114 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 AL034555.1-201ENST00000604816 211 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 U6.98-201ENST00000637157 84 ntBASIC3.34□□□□□ -1.87
HCFC2Q9Y5Z7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HCFC2Q9Y5Z7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HCFC2Q9Y5Z7 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.88
HCFC2Q9Y5Z7 AC007496.3-201ENST00000624987 3443 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-1130P-201ENST00000365434 107 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-22P-201ENST00000384355 107 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RN7SKP220-201ENST00000410611 288 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 HMGN2P16-201ENST00000456802 261 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RPS4XP13-201ENST00000483219 789 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-62P-201ENST00000516526 102 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 HSPE1P7-201ENST00000604681 321 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms