Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL359697.1-201ENST00000624879 587 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC068647.2-201ENST00000637380 353 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 AC013437.2-201ENST00000639587 677 ntBASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN10AQ9Y5Y9 SNORD56.2-201ENST00000363242 71 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-969P-201ENST00000383900 105 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-692P-201ENST00000384496 107 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 MTND3P17-201ENST00000416968 344 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC113410.1-201ENST00000505029 247 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC105185.1-201ENST00000518705 535 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC106038.2-201ENST00000520706 568 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC090049.2-201ENST00000550377 109 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC091489.2-201ENST00000566263 604 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC013244.3-201ENST00000605614 388 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 AC097372.5-201ENST00000623665 376 ntBASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SCN10AQ9Y5Y9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 AC007283.2-201ENST00000424739 197 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 AL606489.2-201ENST00000433886 234 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 USP9YP25-201ENST00000457708 443 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 TPRKBP2-201ENST00000565969 475 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 MIR5695-201ENST00000579717 85 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 AL158211.2-201ENST00000607282 395 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 AC008250.2-201ENST00000615261 205 ntBASIC0.34□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-545P-201ENST00000362681 104 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 MIR10B-201ENST00000385011 110 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AL590135.1-201ENST00000422215 156 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AC019205.3-201ENST00000424573 156 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 FABP5P4-201ENST00000437203 171 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AC016700.2-201ENST00000446011 156 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AC104982.1-201ENST00000478775 574 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AC015911.1-201ENST00000495111 156 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 HMGB1P29-201ENST00000505659 499 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 SNORA19.3-201ENST00000516165 130 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 SCARNA1-201ENST00000517138 166 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AP002001.1-203ENST00000534002 267 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 AL513423.1-201ENST00000621695 132 ntBASIC0.34□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 MRPL42P2-201ENST00000403169 426 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 MIR1265-201ENST00000408444 86 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 HMGN2P34-201ENST00000437647 269 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 RPL22P17-201ENST00000438729 315 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 AC079140.5-201ENST00000507882 310 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 AC025627.3-201ENST00000582078 182 ntBASIC0.33□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-433P-201ENST00000363216 104 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RPS26P5-201ENST00000418544 335 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 HSFY7P-201ENST00000432672 318 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 HSFY8P-201ENST00000437934 318 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 MTND3P1-201ENST00000441336 220 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL606662.1-201ENST00000445763 553 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC022364.2-201ENST00000457963 554 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 LINC01399-202ENST00000458450 244 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 TRBVB-201ENST00000477100 408 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-1069P-201ENST00000516612 133 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RNU1-142P-201ENST00000516682 145 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC022868.1-201ENST00000517767 391 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 SNORA59B-202ENST00000578183 701 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL031281.1-201ENST00000604049 488 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL450472.1-202ENST00000637286 180 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 Y_RNA.167-201ENST00000363735 109 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-793P-201ENST00000384233 104 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 SNORD116-13-201ENST00000384408 92 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 MIR1-2-201ENST00000384961 85 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-685P-201ENST00000517088 95 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC022878.1-201ENST00000530684 149 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 MTND1P15-201ENST00000579262 949 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 MIR4753-201ENST00000585119 83 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL390123.1-201ENST00000603216 237 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 Z99289.3-201ENST00000605586 594 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 PART1_2.1-201ENST00000612397 250 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC116165.2-201ENST00000616705 206 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AL049777.1-201ENST00000622740 518 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 AC106754.2-201ENST00000623006 233 ntBASIC0.32□□□□□ -2.36
SCN10AQ9Y5Y9 RNU1-76P-201ENST00000362903 159 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 RNU4-67P-201ENST00000364569 141 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-1200P-201ENST00000384162 107 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-331P-201ENST00000384724 107 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 RNU6-1031P-201ENST00000384773 107 ntBASIC0.31□□□□□ -2.36
SCN10AQ9Y5Y9 AL451046.2-201ENST00000403074 277 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms