Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 MRPS36P4-201ENST00000534436 298 ntBASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 AL161670.1-201ENST00000554348 137 ntBASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 RPL17P51-201ENST00000605218 238 ntBASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
UBQLN1Q9UMX0 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 MIR340-201ENST00000362125 95 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 Y_RNA.212-201ENST00000364177 102 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-877P-201ENST00000383868 107 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 RNA5SP212-201ENST00000391223 107 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 SNORD115-47-201ENST00000391226 86 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 AL590632.1-201ENST00000424289 371 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 snoU13.6-201ENST00000458785 104 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 SUB1P3-201ENST00000564581 315 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
UBQLN1Q9UMX0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 Y_RNA.157-201ENST00000363638 102 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 Y_RNA.453-201ENST00000384223 109 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AF186996.7-201ENST00000492781 209 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-1098P-201ENST00000516772 96 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-1314P-201ENST00000517139 104 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 MIR3169-201ENST00000578032 83 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 MIR3942-201ENST00000585264 109 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC146944.4-201ENST00000602697 718 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 AC073869.6-201ENST00000640656 341 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.55□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-562P-201ENST00000362731 107 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SNORD50.1-201ENST00000362987 71 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 Y_RNA.151-201ENST00000363566 112 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNA5SP493-201ENST00000364115 91 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SNORD114-6-201ENST00000364393 72 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SNORD116-11-201ENST00000383882 92 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-968P-201ENST00000384076 107 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MIR521-1-201ENST00000384902 87 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SNORA12.2-201ENST00000391040 156 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-1093P-201ENST00000391194 107 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 FGF7P8-201ENST00000402994 292 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC123900.1-201ENST00000420390 96 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC079354.2-201ENST00000453523 154 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 TOMM22P6-201ENST00000465035 409 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-864P-201ENST00000516256 108 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 DEFB131C-201ENST00000528817 165 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC090517.1-201ENST00000569307 266 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MIR3976-201ENST00000606807 139 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 MIR3662-201ENST00000637030 95 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
UBQLN1Q9UMX0 SNORD31B-201ENST00000364977 69 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 SNORA32.2-201ENST00000384049 122 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-933P-201ENST00000384424 107 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-831P-201ENST00000384548 107 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 RNU6-160P-201ENST00000384591 107 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 RNA5SP494-201ENST00000410653 129 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 MTND1P4-201ENST00000435196 415 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 AL035666.1-201ENST00000446195 348 ntBASIC1.53□□□□□ -2.16
UBQLN1Q9UMX0 AC016925.1-201ENST00000458303 298 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms